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Searching for LOC_Os01g37690
[sodium/calcium exchanger protein, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os01g37690.1 |
452 |
95 |
248 |
PF01699.16 |
Na_Ca_ex |
2 |
LOC_Os01g37690.1 |
452 |
289 |
422 |
PF01699.16 |
Na_Ca_ex |
3 |
LOC_Os01g37690.2 |
355 |
2 |
138 |
PF01699.16 |
Na_Ca_ex |
4 |
LOC_Os01g37690.2 |
355 |
179 |
312 |
PF01699.16 |
Na_Ca_ex |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0005515 |
protein binding |
(RGAP) |
2 |
GO:0005215 |
transporter activity |
(RGAP) |
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Biological process
Cellular component
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Environment details
Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000107 |
post-germination stage |
(+) |
2 |
MCP:1000518 |
seedling development stage |
(+) |
3 |
PO:0007063 |
LP.07 seven leaves visible |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Yamada Nana; Theerawitaya Cattarin; Cha-Um Suriyan; Kirdmanee Chalermpol; Takabe Teruhiro; Expression and functional analysis of putative vacuolar Ca(2+)-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars. Protoplasma 2014:
PMID [24482191]
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2 |
Kamiya Takehiro; Akahori Taro; Ashikari Motoyuki; Maeshima Masayoshi; Expression of the vacuolar Ca2+/H+ exchanger, OsCAX1a, in rice: cell and age specificity of expression, and enhancement by Ca2+. Plant & Cell Physiology 2006:47
PMID [16275657]
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