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Searching for LOC_Os01g37760
[glutamate dehydrogenase protein, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os01g37760.1 |
641 |
245 |
375 |
PF02812.10 |
ELFV_dehydrog_N |
2 |
LOC_Os01g37760.1 |
641 |
391 |
638 |
PF00208.13 |
ELFV_dehydrog |
3 |
LOC_Os01g37760.2 |
573 |
245 |
375 |
PF02812.10 |
ELFV_dehydrog_N |
4 |
LOC_Os01g37760.2 |
573 |
391 |
563 |
PF00208.13 |
ELFV_dehydrog |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Biological process
Cellular component
S. No. |
GO Id |
GO Description |
1 |
GO:0005575 |
cellular_component |
(RGAP) |
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007097 |
ammonium sulfate regimen |
(+) |
2 |
MCE:1000082 |
nitrogen deprivation |
(+) |
3 |
MCE:1000083 |
phosphorus deprivition |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
2 |
PO:0007115 |
LP.04 four leaves visible |
(+) |
Plant tissue/organ
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
PO:0009005 |
root |
(+) |
2 |
PO:0009006 |
shoot system |
(+) |
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Ranathunge Kosala; El-Kereamy Ashraf; Gidda Satinder; Bi Yong-Mei; Rothstein Steven J; AMT1;1 transgenic rice plants with enhanced NH4 + permeability show superior growth and higher yield under optimal and suboptimal NH4 + conditions. Journal of experimental botany 2014:65
PMID [24420570]
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2 |
Qiu Xuhua; Xie Weibo; Lian Xingming; Zhang Qifa; Molecular analyses of the rice glutamate dehydrogenase gene family and their response to nitrogen and phosphorous deprivation. Plant Cell Reports 2009:28
PMID [19430792]
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