|
Searching for LOC_Os01g37910
[vacuolar-processing enzyme precursor, putative, expressed ] |
|
|
Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os01g37910.1 |
502 |
65 |
337 |
PF01650.10 |
Peptidase_C13 |
2 |
LOC_Os01g37910.2 |
411 |
1 |
246 |
PF01650.10 |
Peptidase_C13 |
3 |
LOC_Os01g37910.3 |
499 |
65 |
334 |
PF01650.10 |
Peptidase_C13 |
|
The basic information is from RGAP and Pfam/InterPro databases |
|
|
Gene model (download) 
IR64 N22
|
Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
|
N22InfloresenceFC |
|
N22 Root FC |
|
IR64 Flag-leaf FC |
|
IR64InfloresenceFC |
|
IR64 Root FC |
|
|
|
Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0016787 |
hydrolase activity |
(RGAP) |
|
Biological process
Cellular component
S. No. |
GO Id |
GO Description |
1 |
GO:0005773 |
vacuole |
(RGAP) |
|
|
Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007048 |
sodium chloride regimen |
(+) |
2 |
EO:0007105 |
abscisic acid regimen |
(+) |
3 |
EO:0007373 |
mechanical damage |
(+) |
4 |
MCE:1000171 |
nicotin amide |
(+) |
|
Metabolic Pathway details
QTL details
|
Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000107 |
post-germination stage |
(+) |
2 |
MCP:1000518 |
seedling development stage |
(+) |
3 |
MCP:1000521 |
mature plant stage |
(+) |
4 |
PO:0001040 |
dry seed stage |
(+) |
5 |
PO:0001053 |
3 leaf fully expanded |
(+) |
6 |
PO:0001054 |
4 leaf senescence stage |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
|
Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
|
|
Related publications [Sorted by year] |
|
1 |
Christoff Ana Paula; Turchetto-Zolet Andreia Carina; Margis Rogerio; Uncovering legumain genes in rice. Plant science : an international journal of experimental plant biology 2014:215-216
PMID [24388520]
 |
|
|
|