Rice gene details
Searching for LOC_Os01g43440 [TOO MANY MOUTHS precursor, putative ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os01g43440.1 495 187 209 PF00560.25 LRR_1
2 LOC_Os01g43440.1 495 211 232 PF00560.25 LRR_1
3 LOC_Os01g43440.1 495 233 255 PF00560.25 LRR_1
4 LOC_Os01g43440.1 495 257 279 PF00560.25 LRR_1
5 LOC_Os01g43440.1 495 281 303 PF00560.25 LRR_1
6 LOC_Os01g43440.1 495 331 353 PF00560.25 LRR_1
7 LOC_Os01g43440.1 495 355 377 PF00560.25 LRR_1
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  1
N22InfloresenceFC
  -2
N22 Root FC
  1
IR64 Flag-leaf FC
  1
IR64InfloresenceFC
 
IR64 Root FC
  1

Functional details
Molecular Function
Not found
1 GO:0005515 protein binding (RGAP)
2 GO:0004872 receptor activity (RGAP)
Biological process
Not found
1 GO:0009653 anatomical structure morphogenesis (RGAP)
2 GO:0009791 post-embryonic development (RGAP)
3 GO:0007165 signal transduction (RGAP)
4 GO:0009987 cellular process (RGAP)
5 GO:0009719 response to endogenous stimulus (RGAP)
Cellular component
Not found
1 GO:0016020 membrane (RGAP)

Environment details
Not found

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 AQED013 plant height
2 AQED012 plant height
3 AQGP080 grain yield
4 AQGP060 spikelet fertility
5 AQGP001 days to heading
6 AQAH002 blast disease resistance
7 CQAE5 plant height
8 CQAE24 grain yield per plant
9 CQAE20 1000-grain weight
10 CQAE19 1000-grain weight
11 CQAE15 grain number
12 AQE068 plant height
13 AQFP016 culm strength
14 AQFU026 seed length to width ratio
15 AQCE033 primary branch
16 AQCE005 spikelet number
17 CQI3 sodium to potassium ratio
18 CQI2 sodium uptake
19 AQDR076 grain yield per panicle
20 AQDR069 grain yield per panicle
21 AQCU220 leaf width
22 AQCU142 leaf width
23 AQCU156 spikelet number
24 AQCU118 days to heading
25 AQCU076 leaf width
26 CQAS1 plant height
27 AQBK040 seed number
28 CQC1 plant height
29 AQBK003 plant height
30 AQBK008 days to heading
31 AQBK044 seed set percent
32 CQF1 rubisco to nitrogen content ratio
33 AQCZ004 seed dormancy
34 CQAD1 allelopathic effect
35 AQCR001 grain yield
36 AQCS001 ultraviolet-b resistance
37 CQG1 adaxial stomatal frequency
38 AQEN001 blast disease resistance
39 CQX6 culm length
40 CQX21 internode length
41 CQN51 spikelet number
42 CQN5 soluble protein content
43 CQN43 panicle weight
44 CQN26 leaf senescence
45 AQCV031 chalkiness of endosperm
46 CQAO10 1000-seed weight
47 AQCT001 blast disease resistance
48 CQN49 spikelet number
49 CQN3 soluble protein content
50 CQE3 plant height
51 CQE2 plant height
52 CQE6 specific leaf area
53 CQF2 soluble protein content
54 AQCW010 H2O2 content
55 AQCW002 chlorophyll content

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0007065 LP.05 five leaves visible (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0025034 leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Du Hao; Chang Yu; Huang Fei; Xiong Lizhong; GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:
PMID [25418692]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India