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Searching for LOC_Os01g47690
[metallo-beta-lactamase family protein, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os01g47690.1 |
306 |
74 |
243 |
PF00753.19 |
Lactamase_B |
2 |
LOC_Os01g47690.2 |
281 |
74 |
243 |
PF00753.19 |
Lactamase_B |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0016788 |
"hydrolase activity, acting on ester bonds" |
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2 |
GO:0016787 |
hydrolase activity |
(RGAP) |
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Biological process
Cellular component
S. No. |
GO Id |
GO Description |
1 |
GO:0005739 |
mitochondrion |
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007048 |
sodium chloride regimen |
(+) |
2 |
EO:0007319 |
warm/hot air temperature regimen |
(+) |
3 |
MCE:1000069 |
dessication/dehydration stress |
(+) |
4 |
MCE:1000306 |
methylglyoxal |
(+) |
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Metabolic Pathway details
S. No. |
Pathway Id |
Pathway Description |
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1 |
GLYCOLYSIS |
glycolysis I |
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QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
Plant tissue/organ
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
PO:0009005 |
root |
(+) |
2 |
PO:0009006 |
shoot system |
(+) |
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
S. No. |
TO Id |
TO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCT:1000220 |
glyoxalase II activity |
(-) |
2 |
MCT:1000546 |
esterase activity |
(+) |
3 |
MCT:2000012 |
yeast growth |
(+) |
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Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Kaur Charanpreet; Mustafiz Ananda; Sarkar Ananda K; Ariyadasa Thilini U; Singla-Pareek Sneh L; Sopory Sudhir K; Expression of abiotic stress inducible ETHE1-like protein from rice is higher in roots and is regulated by calcium. Physiologia plantarum 2014:
PMID [24410953]
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