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Searching for LOC_Os01g53240
[BURP domain containing protein, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os01g53240.1 |
430 |
211 |
428 |
PF03181.7 |
BURP |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0003674 |
molecular_function |
(RGAP) |
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Biological process
S. No. |
GO Id |
GO Description |
1 |
GO:0009414 |
response to water deprivation |
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2 |
GO:0006950 |
response to stress |
(RGAP) |
3 |
GO:0009628 |
response to abiotic stimulus |
(RGAP) |
4 |
GO:0009719 |
response to endogenous stimulus |
(RGAP) |
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Cellular component
S. No. |
GO Id |
GO Description |
1 |
GO:0005623 |
cell |
(RGAP) |
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007048 |
sodium chloride regimen |
(+) |
2 |
EO:0007105 |
abscisic acid regimen |
(+) |
3 |
EO:0007332 |
cold air temperature regimen |
(+) |
4 |
EO:0007404 |
drought environment |
(+) |
5 |
MCE:1000115 |
slight drought |
(+) |
6 |
MCE:1000117 |
severe drought |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000073 |
inflorescence shorter than 0.2cm |
(+) |
2 |
MCP:1000074 |
inflorescence 0.5-1cm stage |
(+) |
3 |
MCP:1000075 |
inflorescence 3-5cm stage |
(+) |
4 |
MCP:1000076 |
inflorescence more than 10cm stage |
(+) |
5 |
MCP:1000518 |
seedling development stage |
(+) |
6 |
MCP:1000521 |
mature plant stage |
(+) |
7 |
PO:0007073 |
2 formation of axillary shoot |
(+) |
8 |
PO:0007115 |
LP.04 four leaves visible |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Guo Changkui; Ge Xiaochun; Ma Hong; The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82
PMID [23686450]
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2 |
Tao Zeng; Kou Yanjun; Liu Hongbo; Li Xianghua; Xiao Jinghua; Wang Shiping; OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62
PMID [21725029]
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3 |
Ding Xipeng; Hou Xin; Xie Kabin; Xiong Lizhong; Genome-wide identification of BURP domain-containing genes in rice reveals a gene family with diverse structures and responses to abiotic stresses. Planta 2009:230
PMID [19363683]
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4 |
Xiang Yong; Tang Ning; Du Hao; Ye Haiyan; Xiong Lizhong; Characterization of OsbZIP23 as a key player of the basic leucine zipper transcription factor family for conferring abscisic acid sensitivity and salinity and drought tolerance in rice. Plant Physiology 2008:148
PMID [18931143]
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5 |
Katou Shinpei; Kuroda Katsushi; Seo Shigemi; Yanagawa Yuki; Tsuge Tomohiko; Yamazaki Muneo; Miyao Akio; Hirochika Hirohiko; Ohashi Yuko; A calmodulin-binding mitogen-activated protein kinase phosphatase is induced by wounding and regulates the activities of stress-related mitogen-activated protein kinases in rice. Plant & Cell Physiology 2007:48
PMID [17218330]
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