Rice gene details
Searching for LOC_Os01g69210 [mannosyl-oligosaccharide glucosidase, putative, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os01g69210.1 873 68 867 PF03200.8 Glyco_hydro_63
2 LOC_Os01g69210.2 596 77 596 PF03200.8 Glyco_hydro_63
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  1
N22InfloresenceFC
  -1
N22 Root FC
  2
IR64 Flag-leaf FC
  2
IR64InfloresenceFC
  -1
IR64 Root FC
  -1

Functional details
Molecular Function
S. No. GO Id GO Description
1 GO:0016787 hydrolase activity (RGAP)
Biological process
S. No. GO Id GO Description
1 GO:0009408 response to heat  
2 GO:0009409 response to cold  
3 GO:0009733 response to auxin stimulus  
4 GO:0009737 response to abscisic acid stimulus  
5 GO:0009751 response to salicylic acid stimulus  
6 GO:0009753 response to jasmonic acid stimulus  
7 GO:0010541 acropetal auxin transport  
8 GO:0030154 cell differentiation (RGAP)
9 GO:0007275 multicellular organismal development (RGAP)
10 GO:0008152 metabolic process (RGAP)
11 GO:0009653 anatomical structure morphogenesis (RGAP)
Cellular component
S. No. GO Id GO Description
1 GO:0005783 endoplasmic reticulum  
2 GO:0005783 endoplasmic reticulum (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007070 indole acetic acid regimen (+)
2 EO:0007080 jasmonic acid regimen (+)
3 EO:0007105 abscisic acid regimen (+)
4 EO:0007173 warm/hot temperature regimen (+)
5 EO:0007174 cold temperature regimen (+)
6 EO:0007180 2,4-dichlorophenoxyacetic acid (+)
7 EO:0007187 salicylic acid regimen (+)
8 EO:0007204 1-naphthaleneacetic acid (+)
9 MCE:1000023 benzyl aminopurine (BPA) (+)
10 MCE:1000063 epibrassinolide (+)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 AQFE068 100-grain weight
2 AQED027 panicle number
3 AQFE067 100-grain weight
4 AQFR030 seedling vigor
5 CQAE6 plant height
6 DQC3 root number
7 AQD016 leaf drying
8 AQO077 root number
9 AQC003 root number
10 AQCU208 leaf length
11 AQCU038 spikelet number
12 AQCU180 days to heading
13 AQCE023 primary branch length
14 AQFW014 spikelet number
15 AQFR022 seedling vigor
16 AQCU100 spikelet fertility
17 AQAP045 brown planthopper resistance
18 AQGB033 grain width
19 AQAW033 dry mass
20 CQE5 leaf height
21 AQEG001 plant height
22 AQGI250 total biomass yield
23 AQGI255 total biomass yield
24 AQGI070 root dry weight
25 AQCY031 1000-seed weight
26 AQAG025 grain number
27 AQAE013 plant height
28 AQAB074 spikelet number
29 AQAB048 spikelet number
30 AQFD013 tiller bud dormancy
31 AQFE103 grain shattering
32 AQED042 1000-seed weight
33 AQED041 1000-seed weight
34 CQAS7 spikelet density
35 CQAS6 spikelet number
36 CQAS5 panicle number
37 CQAS4 panicle length
38 CQAS3 days to maturity
39 AQEE013 head rice
40 AQED026 panicle number
41 AQEP001 seedling vigor
42 CQAQ3 plant height
43 CQAX15 plant height
44 CQAX1 plant height
45 CQAV1 osmotic adjustment capacity
46 AQFE094 plant height
47 AQFE093 plant height
48 AQCN022 rice yellow mottle virus resistance
49 AQCN021 rice yellow mottle virus resistance
50 AQCN020 rice yellow mottle virus resistance
51 AQCN019 rice yellow mottle virus resistance
52 AQCN018 rice yellow mottle virus resistance
53 AQCN017 rice yellow mottle virus resistance
54 AQCN016 rice yellow mottle virus resistance
55 AQCN002 tiller number
56 AQCN003 days to heading
57 AQCN001 plant height
58 AQEP008 seedling vigor
59 AQEP007 seedling vigor
60 AQEA012 plant height
61 AQEA013 plant height
62 AQEA011 plant height
63 AQEA010 plant height
64 AQEA009 plant height
65 AQEA008 plant height
66 AQEA007 plant height
67 AQEA006 plant height
68 AQEA005 plant height
69 AQEA004 plant height
70 AQEA003 plant height
71 AQEA002 plant height
72 AQEA001 plant height
73 AQDV054 1000-seed weight
74 AQDV045 panicle length
75 AQDV041 plant height
76 AQDV038 panicle exsertion
77 AQDV015 harvest index
78 AQDV026 panicle number
79 AQDV008 days to heading
80 AQAS002 plant height
81 DQF9 penetrated root thickness
82 DQE46 relative water content
83 DQE45 relative water content
84 DQE13 leaf rolling
85 DQE12 leaf rolling
86 CQV6 plant height
87 CQV5 plant height
88 CQV3 plant height
89 CQV4 plant height
90 CQV19 plant height
91 CQV15 plant height
92 CQV12 plant height
93 CQV1 plant height
94 CQQ6 root weight
95 CQQ33 plant height
96 CQQ32 root weight
97 CQQ13 root dry weight to tiller number ratio
98 CQAI6 plant height
99 CQAI3 plant height
100 CQAB9 plant height
101 CQAI1 plant height
102 CQAB8 plant height
103 CQAB7 plant height
104 CQAB6 plant height
105 CQAB5 plant height
106 CQAB4 plant height
107 CQAB11 plant height
108 CQAB10 plant height
109 AQFE051 panicle length
110 AQFE050 panicle length
111 AQFE049 panicle length
112 AQFE006 days to heading
113 AQFE005 days to heading
114 AQDH001 seed length
115 AQBE049 tiller number
116 AQBE048 tiller number
117 AQBE047 tiller number
118 AQBE046 tiller number
119 AQBE012 tiller number
120 AQBE011 tiller number
121 AQBE010 tiller number
122 AQBE009 tiller number
123 AQBE007 tiller number
124 AQBE008 tiller number
125 AQBE006 tiller number
126 AQBE005 tiller number
127 AQBC076 leaf length
128 AQBE004 tiller number
129 AQBC075 leaf length
130 AQBC037 tiller number
131 AQBC074 leaf length
132 AQBC036 tiller number
133 AQBC025 panicle number
134 AQBC035 tiller number
135 AQBC024 panicle number
136 AQBC005 plant height
137 AQBC023 panicle number
138 AQBC004 plant height
139 AQBC003 plant height
140 AQBC002 plant height
141 AQBC001 plant height
142 AQBB038 plant height
143 AQBB037 plant height
144 AQBB036 plant height
145 AQBB035 plant height
146 AQBB034 plant height
147 AQBB033 plant height
148 AQBB032 plant height
149 AQBB031 plant height
150 AQBB030 plant height
151 AQBB029 plant height
152 AQBB028 plant height
153 AQBB027 plant height
154 AQBB026 plant height
155 AQBB025 plant height
156 AQBB024 plant height
157 AQBB023 plant height
158 AQBB022 plant height
159 AQBB021 plant height
160 AQBB020 plant height
161 AQBB019 plant height
162 AQBB018 plant height
163 AQBB017 plant height
164 AQBB015 plant height
165 AQBB016 plant height
166 AQBB014 plant height
167 AQBB012 plant height
168 AQBB013 plant height
169 AQBB011 plant height
170 AQBB010 plant height
171 AQBB009 plant height
172 AQBB008 plant height
173 AQBB007 plant height
174 AQBB006 plant height
175 AQBB005 plant height
176 AQBB004 plant height
177 AQBB003 plant height
178 AQBB002 plant height
179 AQBB001 plant height
180 CQZ2 plant height
181 AQDQ008 plant height
182 AQY005 plant height
183 AQY001 plant height
184 AQJ011 grain yield
185 AQJ008 spikelet sterility
186 AQJ002 plant height
187 AQG017 biomass yield
188 AQG009 panicle number
189 AQG007 panicle exsertion
190 AQG005 panicle length
191 AQG001 plant height
192 CQAX30 plant height
193 AQJ004 panicle number
194 CQX5 culm length
195 CQX22 internode length
196 CQX17 internode length
197 AQBV009 leaf angle
198 AQCU132 leaf length
199 AQAQ008 blast disease resistance
200 CQN1 nadh-dependent glutamate synthase content
201 CQN4 soluble protein content
202 AQCS004 ultraviolet-b resistance
203 AQED013 plant height
204 AQED012 plant height
205 AQBK040 seed number
206 AQCS001 ultraviolet-b resistance
207 CQG1 adaxial stomatal frequency
208 CQN49 spikelet number
209 CQN3 soluble protein content
210 CQE3 plant height
211 CQE2 plant height

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000107 post-germination stage (+)
2 MCP:1000518 seedling development stage (+)
3 MCP:1000521 mature plant stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000258 root segment, 1 cm from tip (+)
2 MCP:1000259 root segment, 1-2cm from root tip (+)
3 MCP:1000462 root segment, 3-4cm from tip (+)
4 MCP:1000582 root segment, 4-5 cm from root tip (+)
5 MCP:1000583 root segment, 5-6 cm from root tip (+)
6 MCP:1000593 lateral root initiation zone (+)
7 PO:0000016 lateral root primordium (+)
8 PO:0000025 root tip (+)
9 PO:0004013 epidermal cell (+)
10 PO:0008037 seedling (+)
11 PO:0008039 stem base (+)
12 PO:0009005 root (+)
13 PO:0009006 shoot system (+)
14 PO:0009046 flower (+)
15 PO:0009047 stem (+)
16 PO:0009049 inflorescence (+)
17 PO:0020103 flag leaf (+)
18 PO:0020125 elongation zone (+)
19 PO:0020127 primary root (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
S. No. TO Id TO Description Presence(+) or absence(-) of gene expression /activity
1 MCT:1000121 root growth (+)
2 MCT:1000343 primary root length (+)
3 MCT:1000375 cellulose content (+)
4 MCT:1000456 root hair number (+)
5 MCT:1000533 cell wall thickness (+)
6 MCT:1000629 auxin accumulation (+)
7 MCT:1000655 root meristem size (+)
8 MCT:1000656 cell division (+)
9 TO:0001012 lateral root length (+)
10 TO:0002665 root hair length (+)
11 TO:0020106 Indole-3-acetic acid content (+)
12 TO:0020107 plant cell length (+)

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Wang Suikang; Xu Yanxia; Li Zhilan; Zhang Saina; Lim Jae-Min; Lee Kyun Oh; Li Chuanyou; Qian Qian; Jiang Dean; Qi Yanhua; OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:
PMID [24597623]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India