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Searching for LOC_Os01g69920
[histidine kinase, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os01g69920.1 |
1024 |
151 |
377 |
PF03924.5 |
CHASE |
2 |
LOC_Os01g69920.1 |
1024 |
438 |
503 |
PF00512.17 |
HisKA |
3 |
LOC_Os01g69920.1 |
1024 |
550 |
714 |
PF02518.18 |
HATPase_c |
4 |
LOC_Os01g69920.1 |
1024 |
881 |
1013 |
PF00072.16 |
Response_reg |
5 |
LOC_Os01g69920.2 |
867 |
1 |
220 |
PF03924.5 |
CHASE |
6 |
LOC_Os01g69920.2 |
867 |
281 |
346 |
PF00512.17 |
HisKA |
7 |
LOC_Os01g69920.2 |
867 |
393 |
557 |
PF02518.18 |
HATPase_c |
8 |
LOC_Os01g69920.2 |
867 |
724 |
856 |
PF00072.16 |
Response_reg |
9 |
LOC_Os01g69920.3 |
939 |
151 |
377 |
PF03924.5 |
CHASE |
10 |
LOC_Os01g69920.3 |
939 |
438 |
503 |
PF00512.17 |
HisKA |
11 |
LOC_Os01g69920.3 |
939 |
550 |
714 |
PF02518.18 |
HATPase_c |
12 |
LOC_Os01g69920.3 |
939 |
881 |
938 |
PF00072.16 |
Response_reg |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Biological process
Cellular component
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Environment details
Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
2 |
PO:0001053 |
3 leaf fully expanded |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
S. No. |
TO Id |
TO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCT:1000034 |
superoxide dismutase (SOD) activity |
(+) |
2 |
MCT:1000038 |
catalase (CAT) activity |
(+) |
3 |
MCT:1000044 |
ascorbate peroxidase activity (APX) |
(+) |
4 |
MCT:1000218 |
hydrogen peroxide accumulation |
(+) |
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Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Wen Feng; Qin Tingting; Wang Yao; Dong Wen; Zhang Aying; Tan Mingpu; Jiang Mingyi; OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:
PMID [24912543]
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