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Searching for LOC_Os02g39340
[glycine-rich protein, putative, expressed ] |
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Basic information [Interpro DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Interpro ID |
Domain Name |
1 |
LOC_Os02g39340.1 |
251 |
114 |
133 |
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seg |
2 |
LOC_Os02g39340.2 |
188 |
114 |
133 |
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seg |
3 |
LOC_Os02g39340.2 |
188 |
156 |
182 |
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seg |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Biological process
Cellular component
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Environment details
Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(-) |
2 |
PO:0007041 |
inflorescence emergence from flag leaf sheath |
(-) |
3 |
PO:0007106 |
LP.03 three leaves visible |
(-) |
4 |
PO:0007115 |
LP.04 four leaves visible |
(-) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
S. No. |
TO Id |
TO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
TO:0000293 |
chlorophyll-a content |
(-) |
2 |
TO:0000295 |
chlorophyll-b content |
(-) |
3 |
TO:0000495 |
chlorophyll content |
(-) |
4 |
TO:0000496 |
carotenoid content |
(-) |
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Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Jiang Quan; Ma Xiaojing; Gong Xiaodi; Zhang Jianhui; Teng Sheng; Xu Jianlong; Lin Dongzhi; Dong Yanjun; The rice OsDG2 encoding a glycine-rich protein is involved in the regulation of chloroplast development during early seedling stage. Plant cell reports 2014:
PMID [24430865]
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