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Searching for LOC_Os02g43330
[homeobox associated leucine zipper, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os02g43330.1 |
262 |
64 |
119 |
PF00046.21 |
Homeobox |
2 |
LOC_Os02g43330.1 |
262 |
120 |
164 |
PF02183.10 |
HALZ |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0001071 |
nucleic acid binding transcription factor activity |
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2 |
GO:0003700 |
sequence-specific DNA binding transcription factor activity |
(RGAP) |
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Biological process
Cellular component
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007048 |
sodium chloride regimen |
(+) |
2 |
EO:0007105 |
abscisic acid regimen |
(+) |
3 |
EO:0007173 |
warm/hot temperature regimen |
(+) |
4 |
EO:0007174 |
cold temperature regimen |
(+) |
5 |
EO:0007404 |
drought environment |
(+) |
6 |
EO:0007415 |
hydrogen peroxide |
(+) |
7 |
MCE:1000016 |
polyethylene glycol (PEG) treatment |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
2 |
MCP:1000554 |
inflorescence 3 cm stage |
(+) |
3 |
MCP:1000555 |
inflorescence 8 cm stage |
(+) |
4 |
MCP:1000556 |
inflorescence 12 cm stage |
(+) |
5 |
PO:0007014 |
booting |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Huang Xi; Duan Min; Liao Jiakai; Yuan Xi; Chen Hui; Feng Jiejie; Huang Ji; Zhang Hong-Sheng; OsSLI1, a homeodomain containing transcription activator, involves abscisic acid related stress response in rice (Oryza sativa L.). TheScientificWorldJournal 2014:2014
PMID [25089296]
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2 |
Nakashima Kazuo; Jan Asad; Todaka Daisuke; Maruyama Kyonoshin; Goto Shingo; Shinozaki Kazuo; Yamaguchi-Shinozaki Kazuko; Comparative functional analysis of six drought-responsive promoters in transgenic rice. Planta 2014:239
PMID [24062085]
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3 |
Xiang Yong; Tang Ning; Du Hao; Ye Haiyan; Xiong Lizhong; Characterization of OsbZIP23 as a key player of the basic leucine zipper transcription factor family for conferring abscisic acid sensitivity and salinity and drought tolerance in rice. Plant Physiology 2008:148
PMID [18931143]
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