Rice gene details
Searching for LOC_Os02g44642 [STE_MEKK_ste11_MAP3K.10 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os02g44642.1 895 409 665 PF00069.17 Pkinase
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  1
N22InfloresenceFC
  -1
N22 Root FC
  2
IR64 Flag-leaf FC
  6
IR64InfloresenceFC
  -1
IR64 Root FC
  -1

Functional details
Molecular Function
Not found
1 GO:0000166 nucleotide binding (RGAP)
2 GO:0016301 kinase activity (RGAP)
Biological process
Not found
1 GO:0008152 metabolic process (RGAP)
2 GO:0009987 cellular process (RGAP)
3 GO:0006464 protein modification process (RGAP)
4 GO:0009653 anatomical structure morphogenesis (RGAP)
5 GO:0009791 post-embryonic development (RGAP)
6 GO:0000003 reproduction (RGAP)
7 GO:0009790 embryo development (RGAP)
Cellular component
Not found
1 GO:0005575 cellular_component (RGAP)

Environment details
Not found

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 AQEO014 seed width
2 AQDS077 plant height
3 AQCU088 spikelet number
4 AQZ002 root length
5 CQJ3 panicle number
6 CQAW7 root number
7 CQN59 spikelet weight
8 AQEB010 1000-seed weight
9 AQEB005 1000-seed weight
10 AQEB001 1000-seed weight
11 CQE13 grain number
12 DQC6 penetrated root number
13 DQC13 penetrated to total root ratio
14 CQE12 rubisco to soluble protein content
15 CQN29 leaf senescence
16 AQCW014 chlorophyll content
17 AQEE020 crushed grain percentage
18 AQEJ005 leaf length
19 AQEJ006 leaf length to width ratio
20 AQE086 spikelet number
21 AQAK017 spikelet number
22 CQH6 osmotic adjustment capacity
23 AQFT002 osmotic adjustment capacity
24 AQFW257 spikelet fertility
25 AQFR004 seedling vigor
26 AQEI117 leaf senescence
27 AQEI086 leaf senescence
28 AQEI068 leaf senescence
29 AQEI034 leaf senescence
30 AQEI003 leaf senescence
31 AQCU198 plant height
32 AQCU160 spikelet number
33 AQAP051 brown planthopper resistance
34 AQFD014 tiller bud dormancy
35 AQFD011 tiller bud dormancy
36 AQFD010 tiller bud dormancy
37 AQFE007 days to heading
38 AQFA005 amylose content
39 CQAW6 tiller number
40 AQCN025 rice yellow mottle virus resistance
41 AQCN024 rice yellow mottle virus resistance
42 AQCN004 plant height
43 CQQ25 root thickness
44 CQAI44 root thickness
45 CQAI31 root number
46 AQDH006 seed width
47 AQBQ004 iron sensitivity
48 AQBC026 panicle number
49 AQA041 root thickness
50 AQA028 root number
51 CQAX31 plant height
52 CQAX27 plant height
53 CQAX16 plant height
54 AQEE018 cracked grain percentage
55 AQEE014 head rice
56 CQN55 spikelet number
57 CQAX28 plant height
58 CQAX14 plant height
59 AQBK012 days to heading
60 CQAA17 relative phosphorus distribution between shoot and root
61 CQAA16 relative phosphorus distribution between shoot and root
62 AQE024 grain yield per plant

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0007065 LP.05 five leaves visible (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0025034 leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Du Hao; Chang Yu; Huang Fei; Xiong Lizhong; GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:
PMID [25418692]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India