Rice gene details Home Browse Search Contact Us Feedback Links Searching for LOC_Os02g52230 [coronatine-insensitive protein 1, putative, expressed ] Basic information [Interpro DB] Graphical representation of the protein domains S. No. Locus Id Protein Length Doman Start Domain End Interpro ID Domain Name 1 LOC_Os02g52230.1 668 2 29 seg 2 LOC_Os02g52230.1 668 35 68 seg 3 LOC_Os02g52230.1 668 76 89 seg 4 LOC_Os02g52230.1 668 95 332 no description 5 LOC_Os02g52230.1 668 106 561 F-BOX/LEUCINE RICH REPEAT PROTEIN 6 LOC_Os02g52230.1 668 106 561 GRR1-RELATED, ARATH 7 LOC_Os02g52230.1 668 117 644 RNI-like 8 LOC_Os02g52230.1 668 192 216 IPR006553 no description 9 LOC_Os02g52230.1 668 217 242 IPR006553 no description 10 LOC_Os02g52230.1 668 248 265 seg 11 LOC_Os02g52230.1 668 276 302 IPR013101 LRR_2 12 LOC_Os02g52230.1 668 368 497 no description 13 LOC_Os02g52230.1 668 464 488 IPR006553 no description 14 LOC_Os02g52230.1 668 514 631 no description 15 LOC_Os02g52230.1 668 524 547 IPR006553 no description 16 LOC_Os02g52230.1 668 573 597 IPR006553 no description   The basic information is from RGAP and Pfam/InterPro databases Gene model (download) IR64 N22 Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change] N22 Flag-leaf FC   1 N22InfloresenceFC   2 N22 Root FC   2 IR64 Flag-leaf FC   2 IR64InfloresenceFC   1 IR64 Root FC   2 Functional details Molecular Function Not found 1 GO:0005515 protein binding (RGAP) 2 GO:0003824 catalytic activity (RGAP) Biological process Not found 1 GO:0019538 protein metabolic process (RGAP) 2 GO:0009056 catabolic process (RGAP) 3 GO:0009987 cellular process (RGAP) 4 GO:0006464 protein modification process (RGAP) Cellular component Not found Environment details S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity 1 EO:0007204 1-naphthaleneacetic acid (+) Metabolic Pathway details Not found QTL details S. No. QTL Id QTL Associated Trait 1 AQE012 filled grain number 2 AQQ006 grain yield 3 AQQ002 grain yield 4 AQEX029 total biomass yield 5 AQEX022 root dry weight 6 AQEX016 biomass yield 7 AQCB015 seed set percent 8 AQFE070 100-grain weight 9 AQFE069 100-grain weight 10 AQFJ066 grain yield per plant 11 CQAB18 plant height 12 CQAB17 plant height 13 CQAB16 plant height 14 CQAB15 plant height 15 AQBC008 plant height 16 AQBC007 plant height 17 AQBC006 plant height 18 AQBB071 plant height 19 AQBB070 plant height 20 AQBB069 plant height 21 AQBB068 plant height 22 AQBB066 plant height 23 AQBB067 plant height 24 AQBB065 plant height 25 AQBB063 plant height 26 AQBB064 plant height 27 AQBB062 plant height 28 AQBB061 plant height 29 AQBB060 plant height 30 AQBB059 plant height 31 AQBB057 plant height 32 AQBB058 plant height 33 AQBB056 plant height 34 AQBB055 plant height 35 AQBB054 plant height 36 AQBB052 plant height 37 AQBB053 plant height 38 AQBB051 plant height 39 AQBB050 plant height 40 AQBB049 plant height 41 AQBB048 plant height 42 AQBB047 plant height 43 AQBB046 plant height 44 AQBB045 plant height 45 AQBB044 plant height 46 AQBB043 plant height 47 AQBB042 plant height 48 AQBB041 plant height 49 AQBB040 plant height 50 AQBB039 plant height 51 AQJ005 panicle number 52 AQO089 root number 53 AQO070 root length 54 CQE14 days to heading 55 AQCK006 days to heading 56 AQCW005 chlorophyll content 57 AQCV011 grain width 58 AQCV001 grain length 59 AQFQ002 primary branch 60 AQFQ001 flower number 61 AQDQ014 panicle length 62 AQDQ012 plant height 63 AQDQ013 panicle length 64 AQDQ010 plant height 65 AQDQ011 plant height 66 AQFE114 tiller angle 67 AQED049 grain yield per plant 68 AQED031 grain number 69 AQFU021 protein content 70 AQCR002 grain yield 71 AQFE052 panicle length 72 AQED039 grain number 73 AQEO014 seed width 74 AQDS077 plant height 75 CQN59 spikelet weight 76 AQEB010 1000-seed weight 77 AQEB005 1000-seed weight 78 AQEB001 1000-seed weight 79 CQE13 grain number 80 AQEE020 crushed grain percentage 81 AQFA005 amylose content 82 CQAX31 plant height 83 CQAX27 plant height 84 CQAX28 plant height 85 AQBK012 days to heading 86 CQAA17 relative phosphorus distribution between shoot and root 87 CQAA16 relative phosphorus distribution between shoot and root 88 AQE024 grain yield per plant Plant developmental stage / tissue details Plant development stage S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 MCP:1000518 seedling development stage (+) Plant tissue/organ S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 PO:0009005 root (+) Others S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity Not found Trait details Not found Physical interaction details Interaction type: protein-protein Not found Interaction type: protein-DNA Not found Related publications [Sorted by year] 1  Zhao Heming; Ma Tengfei; Wang Xin; Deng Yingtian; Ma Haoli; Zhang Rongsheng; Zhao Jie; OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014: PMID [25311360] Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India