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Searching for LOC_Os02g52230
[coronatine-insensitive protein 1, putative, expressed ] |
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Basic information [Interpro DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Interpro ID |
Domain Name |
1 |
LOC_Os02g52230.1 |
668 |
2 |
29 |
|
seg |
2 |
LOC_Os02g52230.1 |
668 |
35 |
68 |
|
seg |
3 |
LOC_Os02g52230.1 |
668 |
76 |
89 |
|
seg |
4 |
LOC_Os02g52230.1 |
668 |
95 |
332 |
|
no description |
5 |
LOC_Os02g52230.1 |
668 |
106 |
561 |
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F-BOX/LEUCINE RICH REPEAT PROTEIN |
6 |
LOC_Os02g52230.1 |
668 |
106 |
561 |
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GRR1-RELATED, ARATH |
7 |
LOC_Os02g52230.1 |
668 |
117 |
644 |
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RNI-like |
8 |
LOC_Os02g52230.1 |
668 |
192 |
216 |
IPR006553 |
no description |
9 |
LOC_Os02g52230.1 |
668 |
217 |
242 |
IPR006553 |
no description |
10 |
LOC_Os02g52230.1 |
668 |
248 |
265 |
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seg |
11 |
LOC_Os02g52230.1 |
668 |
276 |
302 |
IPR013101 |
LRR_2 |
12 |
LOC_Os02g52230.1 |
668 |
368 |
497 |
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no description |
13 |
LOC_Os02g52230.1 |
668 |
464 |
488 |
IPR006553 |
no description |
14 |
LOC_Os02g52230.1 |
668 |
514 |
631 |
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no description |
15 |
LOC_Os02g52230.1 |
668 |
524 |
547 |
IPR006553 |
no description |
16 |
LOC_Os02g52230.1 |
668 |
573 |
597 |
IPR006553 |
no description |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Biological process
Cellular component
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007204 |
1-naphthaleneacetic acid |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
Plant tissue/organ
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
PO:0009005 |
root |
(+) |
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Zhao Heming; Ma Tengfei; Wang Xin; Deng Yingtian; Ma Haoli; Zhang Rongsheng; Zhao Jie; OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:
PMID [25311360]
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