Rice gene details
Searching for LOC_Os02g52710 [alpha-amylase precursor, putative, expressed ]


Functional details
Molecular Function
Not found
1 GO:0016787 hydrolase activity (RGAP)
Biological process
Not found
1 GO:0008152 metabolic process (RGAP)
2 GO:0009719 response to endogenous stimulus (RGAP)
Cellular component
Not found
1 GO:0005576 extracellular region (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007105 abscisic acid regimen (+)
2 EO:0007198 water environment (+)
3 MCE:1000010 submergence stress (+)

Metabolic Pathway details
S. No. Pathway Id Pathway Description
1 PWY-842 starch degradation

QTL details
S. No. QTL Id QTL Associated Trait
1 AQE012 filled grain number
2 AQQ006 grain yield
3 AQQ002 grain yield
4 AQEX029 total biomass yield
5 AQEX022 root dry weight
6 AQEX016 biomass yield
7 AQCB015 seed set percent
8 AQFE070 100-grain weight
9 AQFE069 100-grain weight
10 CQAB18 plant height
11 CQAB17 plant height
12 CQAB16 plant height
13 CQAB15 plant height
14 AQBC008 plant height
15 AQBC007 plant height
16 AQBC006 plant height
17 AQBB071 plant height
18 AQBB070 plant height
19 AQBB069 plant height
20 AQBB068 plant height
21 AQBB066 plant height
22 AQBB067 plant height
23 AQBB065 plant height
24 AQBB063 plant height
25 AQBB064 plant height
26 AQBB062 plant height
27 AQBB061 plant height
28 AQBB060 plant height
29 AQBB059 plant height
30 AQBB057 plant height
31 AQBB058 plant height
32 AQBB056 plant height
33 AQBB055 plant height
34 AQBB054 plant height
35 AQBB052 plant height
36 AQBB053 plant height
37 AQBB051 plant height
38 AQBB050 plant height
39 AQBB049 plant height
40 AQBB048 plant height
41 AQBB047 plant height
42 AQBB046 plant height
43 AQBB045 plant height
44 AQBB044 plant height
45 AQBB043 plant height
46 AQBB042 plant height
47 AQBB041 plant height
48 AQBB040 plant height
49 AQBB039 plant height
50 AQJ005 panicle number
51 AQO089 root number
52 AQO070 root length
53 CQE14 days to heading
54 AQCK006 days to heading
55 AQFQ002 primary branch
56 AQFQ001 flower number
57 AQDQ014 panicle length
58 AQDQ012 plant height
59 AQDQ013 panicle length
60 AQDQ010 plant height
61 AQDQ011 plant height
62 AQFE114 tiller angle
63 AQED049 grain yield per plant
64 AQED031 grain number
65 AQCR002 grain yield
66 AQFE052 panicle length
67 AQED039 grain number
68 AQEO014 seed width
69 AQDS077 plant height
70 CQN59 spikelet weight
71 AQEB010 1000-seed weight
72 AQEB005 1000-seed weight
73 AQEB001 1000-seed weight
74 CQE13 grain number
75 AQEE020 crushed grain percentage
76 AQFA005 amylose content
77 CQAX31 plant height
78 CQAX27 plant height
79 CQAX28 plant height
80 AQBK012 days to heading
81 CQAA17 relative phosphorus distribution between shoot and root
82 CQAA16 relative phosphorus distribution between shoot and root
83 AQE024 grain yield per plant

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000107 post-germination stage (+)
2 PO:0007022 imbibition (+)
3 PO:0007055 0.0 dry seed (+)
4 PO:0007057 0 germination (+)
5 PO:0007065 LP.05 five leaves visible (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0009009 plant embryo (+)
2 PO:0009010 seed (+)
3 PO:0009089 endosperm (+)
4 PO:0025034 leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Du Hao; Chang Yu; Huang Fei; Xiong Lizhong; GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:
PMID [25418692]


Wu Jiahe; Zhu Chuanfeng; Pang Jinhuan; Zhang Xiangrong; Yang Chunlin; Xia Guixian; Tian Yingchuan; He Chaozu; OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80
PMID [25353370]


Zhang Dongping; Chen Li; Li Dahong; Lv Bing; Chen Yun; Chen Jingui; XuejiaoYan ; Liang Jiansheng; OsRACK1 is involved in abscisic acid- and H2O2-mediated signaling to regulate seed germination in rice (Oryza sativa, L.). PloS one 2014:9
PMID [24865690]


Park Gi-Gyeong; Park Jong-Jin; Yoon Jinmi; Yu Sun-Nam; An Gynheung; A RING finger E3 ligase gene, Oryza sativa Delayed Seed Germination 1 (OsDSG1), controls seed germination and stress responses in rice. Plant Molecular Biology 2010:74
PMID [20878348]


Kamiya Takehiro; Akahori Taro; Ashikari Motoyuki; Maeshima Masayoshi; Expression of the vacuolar Ca2+/H+ exchanger, OsCAX1a, in rice: cell and age specificity of expression, and enhancement by Ca2+. Plant & Cell Physiology 2006:47
PMID [16275657]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India