Rice gene details
Searching for LOC_Os02g52780 [bZIP transcription factor, putative, expressed ]


Functional details
Molecular Function
S. No. GO Id GO Description
1 GO:0000989 transcription factor binding transcription factor activity  
2 GO:0016563 transcription activator activity  
3 GO:0003677 DNA binding (RGAP)
4 GO:0005515 protein binding (RGAP)
5 GO:0003700 sequence-specific DNA binding transcription factor activity (RGAP)
Biological process
S. No. GO Id GO Description
1 GO:0009414 response to water deprivation  
2 GO:0009620 response to fungus  
3 GO:0009633 drought tolerance  
4 GO:0009651 response to salt stress  
5 GO:0009733 response to auxin stimulus  
6 GO:0009737 response to abscisic acid stimulus  
7 GO:0009753 response to jasmonic acid stimulus  
8 GO:0009719 response to endogenous stimulus (RGAP)
9 GO:0007165 signal transduction (RGAP)
10 GO:0006950 response to stress (RGAP)
11 GO:0009628 response to abiotic stimulus (RGAP)
12 GO:0009058 biosynthetic process (RGAP)
13 GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (RGAP)
14 GO:0019725 cellular homeostasis (RGAP)
Cellular component
S. No. GO Id GO Description
1 GO:0005634 nucleus  
2 GO:0005634 nucleus (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007048 sodium chloride regimen (+)
2 EO:0007080 jasmonic acid regimen (+)
3 EO:0007105 abscisic acid regimen (+)
4 EO:0007180 2,4-dichlorophenoxyacetic acid (+)
5 EO:0007187 salicylic acid regimen (+)
6 EO:0007204 1-naphthaleneacetic acid (+)
7 EO:0007226 Magnaporthe grisea (-)
8 EO:0007332 cold air temperature regimen (+)
9 EO:0007404 drought environment (+)
10 EO:0007407 methyl jasmonate (+)
11 MCE:1000016 polyethylene glycol (PEG) treatment (+)
12 MCE:1000024 drought stress in PVC pipes (+)
13 MCE:1000056 1-aminocyclopropane-1-carboxylic acid (+)
14 MCE:1000069 dessication/dehydration stress (+)
15 MCE:1000075 recovery treatment (+)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 AQE012 filled grain number
2 AQQ006 grain yield
3 AQQ002 grain yield
4 AQEX029 total biomass yield
5 AQEX022 root dry weight
6 AQEX016 biomass yield
7 AQCB015 seed set percent
8 AQFE070 100-grain weight
9 AQFE069 100-grain weight
10 CQAB18 plant height
11 CQAB17 plant height
12 CQAB16 plant height
13 CQAB15 plant height
14 AQBC008 plant height
15 AQBC007 plant height
16 AQBC006 plant height
17 AQBB071 plant height
18 AQBB070 plant height
19 AQBB069 plant height
20 AQBB068 plant height
21 AQBB066 plant height
22 AQBB067 plant height
23 AQBB065 plant height
24 AQBB063 plant height
25 AQBB064 plant height
26 AQBB062 plant height
27 AQBB061 plant height
28 AQBB060 plant height
29 AQBB059 plant height
30 AQBB057 plant height
31 AQBB058 plant height
32 AQBB056 plant height
33 AQBB055 plant height
34 AQBB054 plant height
35 AQBB052 plant height
36 AQBB053 plant height
37 AQBB051 plant height
38 AQBB050 plant height
39 AQBB049 plant height
40 AQBB048 plant height
41 AQBB047 plant height
42 AQBB046 plant height
43 AQBB045 plant height
44 AQBB044 plant height
45 AQBB043 plant height
46 AQBB042 plant height
47 AQBB041 plant height
48 AQBB040 plant height
49 AQBB039 plant height
50 AQJ005 panicle number
51 AQO089 root number
52 AQO070 root length
53 CQE14 days to heading
54 AQCK006 days to heading
55 AQFQ002 primary branch
56 AQFQ001 flower number
57 AQDQ014 panicle length
58 AQDQ012 plant height
59 AQDQ013 panicle length
60 AQDQ010 plant height
61 AQDQ011 plant height
62 AQFE114 tiller angle
63 AQED049 grain yield per plant
64 AQED031 grain number
65 AQCR002 grain yield
66 AQFE052 panicle length
67 AQED039 grain number
68 AQEO014 seed width
69 AQDS077 plant height
70 CQN59 spikelet weight
71 AQEB010 1000-seed weight
72 AQEB005 1000-seed weight
73 AQEB001 1000-seed weight
74 CQE13 grain number
75 AQEE020 crushed grain percentage
76 AQFA005 amylose content
77 CQAX31 plant height
78 CQAX27 plant height
79 CQAX28 plant height
80 AQBK012 days to heading
81 CQAA17 relative phosphorus distribution between shoot and root
82 CQAA16 relative phosphorus distribution between shoot and root
83 AQE024 grain yield per plant

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000107 post-germination stage (+)
2 MCP:1000518 seedling development stage (+)
3 PO:0007065 LP.05 five leaves visible (+)
4 PO:0007130 B reproductive growth (+)
5 PO:0007616 4 anthesis (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0000003 whole plant (+)
2 PO:0005052 plant callus (+)
3 PO:0008037 seedling (+)
4 PO:0009005 root (+)
5 PO:0009006 shoot system (+)
6 PO:0009025 vascular leaf (+)
7 PO:0009047 stem (+)
8 PO:0009049 inflorescence (+)
9 PO:0020039 leaf lamina (+)
10 PO:0020103 flag leaf (+)
11 PO:0020104 leaf sheath (+)
12 PO:0025034 leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
S. No. TO Id TO Description Presence(+) or absence(-) of gene expression /activity
1 MCT:1000039 water loss (+)
2 TO:0000019 seedling height (+)
3 TO:0000227 root length (+)
4 TO:0000276 drought tolerance (+)
5 TO:0000280 seedling vigor (+)
6 TO:0000396 grain yield (+)
7 TO:0000430 germination rate (+)
8 TO:0000515 relative growth rate (+)
9 TO:0002712 stay green trait (+)
10 TO:0006001 salt tolerance (+)
11 TO:0010001 percent germination (+)

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Du Hao; Chang Yu; Huang Fei; Xiong Lizhong; GID1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice. Journal of integrative plant biology 2014:
PMID [25418692]


Luo Chengke; Guo Chiming; Wang Wujing; Wang Liangjiang; Chen Liang; Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant cell reports 2014:33
PMID [24247850]


Wei Shuya; Hu Wei; Deng Xiaomin; Zhang Yingying; Liu Xiaodong; Zhao Xudong; Luo Qingchen; Jin Zhengyi; Li Yin; Zhou Shiyi; Sun Tao; Wang Lianzhe; Yang Guangxiao; He Guangyuan; A rice calcium-dependent protein kinase OsCPK9 positively regulates drought stress tolerance and spikelet fertility. BMC plant biology 2014:14
PMID [24884869]


Du Hao; Wu Nai; Chang Yu; Li Xianghua; Xiao Jinghua; Xiong Lizhong; Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83
PMID [23846670]


Du Hao; Wu Nai; Fu Jing; Wang Shiping; Li Xianghua; Xiao Jinghua; Xiong Lizhong; A GH3 family member, OsGH3-2, modulates auxin and abscisic acid levels and differentially affects drought and cold tolerance in rice. Journal of Experimental Botany 2012:
PMID [23112280]


Asano Takayuki; Hakata Makoto; Nakamura Hidemitsu; Aoki Naohiro; Komatsu Setsuko; Ichikawa Hiroaki; Hirochika Hirohiko; Ohsugi Ryu; Functional characterisation of OsCPK21, a calcium-dependent protein kinase that confers salt tolerance in rice. Plant Molecular Biology 2011:75
PMID [21136139]


Du Hao; Liu Linhong; You Lei; Yang Mei; He Yubing; Li Xianghua; Xiong Lizhong; Characterization of an inositol 1,3,4-trisphosphate 5/6-kinase gene that is essential for drought and salt stress responses in rice. Plant Molecular Biology 2011:
PMID [22038091]


Du Hao; Wang Nili; Cui Fei; Li Xianghua; Xiao Jinghua; Xiong Lizhong; Characterization of the beta-carotene hydroxylase gene DSM2 conferring drought and oxidative stress resistance by increasing xanthophylls and abscisic acid synthesis in rice. Plant Physiology 2010:154
PMID [20852032]


Lu Guojun; Gao Chenxi; Zheng Xingnan; Han Bin; Identification of OsbZIP72 as a positive regulator of ABA response and drought tolerance in rice. Planta 2009:229
PMID [19048288]


10  Xiang Yong; Tang Ning; Du Hao; Ye Haiyan; Xiong Lizhong; Characterization of OsbZIP23 as a key player of the basic leucine zipper transcription factor family for conferring abscisic acid sensitivity and salinity and drought tolerance in rice. Plant Physiology 2008:148
PMID [18931143]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India