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Searching for LOC_Os03g01740 
[expressed protein ] |
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| Basic information [Interpro DB] |
Graphical representation of the protein domains |
| S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Interpro ID |
Domain Name |
| 1 |
LOC_Os03g01740.1 |
107 |
10 |
21 |
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seg |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
| N22 Flag-leaf FC |
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| N22InfloresenceFC |
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| N22 Root FC |
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| IR64 Flag-leaf FC |
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| IR64InfloresenceFC |
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| IR64 Root FC |
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Functional details
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Molecular Function
Biological process
Cellular component
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Environment details
| S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
| 1 |
EO:0007105 |
abscisic acid regimen |
(+) |
| 2 |
EO:0007173 |
warm/hot temperature regimen |
(+) |
| 3 |
EO:0007332 |
cold air temperature regimen |
(+) |
| 4 |
EO:0007404 |
drought environment |
(+) |
| 5 |
MCE:1000097 |
propionic acid |
(+) |
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Metabolic Pathway details
QTL details
| S. No. |
QTL Id |
QTL Associated Trait |
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| 1 |
CQAE2 |
days to heading |
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Plant developmental stage / tissue details
Plant development stage
| S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
| 1 |
MCP:1000518 |
seedling development stage |
(+) |
Plant tissue/organ
| S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
| 1 |
MCP:1000315 |
second leaf from base |
(+) |
Others
| S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
| Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
| S. No. |
Primary rice gene loci |
Interacting rice gene loci |
Experiment type |
Id |
Domain name/N or C term |
Amino acid involved in interaction |
Id |
Domain name/N or C term |
Amino acid involved in interaction |
| 1 |
LOC_Os03g01740 |
- |
--- |
LOC_Os03g02680 |
- |
--- |
Protein-protein interaction analysis : Yeast two-hybrid analysis |
| 2 |
LOC_Os03g01740 |
- |
--- |
LOC_Os03g10650 |
- |
--- |
Protein-protein interaction analysis : Yeast two-hybrid analysis |
| 3 |
LOC_Os03g01740 |
- |
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LOC_Os09g29100 |
- |
--- |
Protein-protein interaction analysis : Yeast two-hybrid analysis |
| 4 |
LOC_Os03g01740 |
- |
--- |
LOC_Os03g02680 |
- |
--- |
Protein-protein interaction analysis : Fluorescence Resonance Energy Transfer (FRET) assay |
| 5 |
LOC_Os03g01740 |
- |
--- |
LOC_Os03g10650 |
- |
--- |
Protein-protein interaction analysis : Fluorescence Resonance Energy Transfer (FRET) assay |
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Interaction type: protein-DNA
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| Related publications [Sorted by year] |
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| 1 |
Peres Adrian; Churchman Michelle L; Hariharan Srivaidehirani; Himanen Kristiina; Verkest Aurine; Vandepoele Klaas; Magyar Zoltan; Hatzfeld Yves; Van Der Schueren Els; Beemster Gerrit T S; Frankard Valerie; Larkin John C; Inzé Dirk; De Veylder Lieven; Novel plant-specific cyclin-dependent kinase inhibitors induced by biotic and abiotic stresses. The Journal of biological chemistry 2007:282
PMID [17599908]
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