Rice gene details
Searching for LOC_Os03g03910 [catalase domain containing protein, expressed ]


Functional details
Molecular Function
S. No. GO Id GO Description
1 GO:0003824 catalytic activity (RGAP)
2 GO:0005515 protein binding (RGAP)
3 GO:0005488 binding (RGAP)
Biological process
S. No. GO Id GO Description
1 GO:0009414 response to water deprivation  
2 GO:0009646 response to absence of light  
3 GO:0009737 response to abscisic acid stimulus  
4 GO:0010269 response to selenium ion  
5 GO:0010272 response to silver ion  
6 GO:0042542 response to hydrogen peroxide  
7 GO:0046685 response to arsenic-containing substance  
8 GO:0009628 response to abiotic stimulus (RGAP)
9 GO:0008152 metabolic process (RGAP)
10 GO:0019725 cellular homeostasis (RGAP)
11 GO:0009991 response to extracellular stimulus (RGAP)
12 GO:0007154 cell communication (RGAP)
13 GO:0006950 response to stress (RGAP)
14 GO:0008219 cell death (RGAP)
15 GO:0009056 catabolic process (RGAP)
16 GO:0009987 cellular process (RGAP)
Cellular component
S. No. GO Id GO Description
1 GO:0005777 peroxisome (RGAP)
2 GO:0005739 mitochondrion (RGAP)
3 GO:0009536 plastid (RGAP)
4 GO:0005840 ribosome (RGAP)
5 GO:0005829 cytosol (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007105 abscisic acid regimen (+)
2 EO:0007198 water environment (+)
3 EO:0007261 copper nutrient regimen (+)
4 EO:0007270 continuous dark (no light) regimen (+)
5 EO:0007415 hydrogen peroxide (+)
6 MCE:1000016 polyethylene glycol (PEG) treatment (+)
7 MCE:1000091 methyl viologen/paraquat (+)
8 MCE:1000317 tungstate (+)
9 MCE:1000318 Nordihydroguaiaretic acid (NDGA) (+)
10 MCE:1000340 silver nanoparticles (+)
11 MCE:1000345 sodium arsenite (Na2HAsO2) (+)
12 MCE:1000346 sodium selenite (Na2O3Se) (+)

Metabolic Pathway details
S. No. Pathway Id Pathway Description
1 DETOX1-PWY removal of superoxide radicals
2 PWY66-162 oxidative ethanol degradation III

QTL details
S. No. QTL Id QTL Associated Trait
1 CQAI15 tiller number
2 AQEA032 plant height
3 AQEA033 plant height
4 AQEA031 plant height
5 AQBC090 leaf width
6 AQBC091 leaf width
7 AQBC011 plant height
8 AQBC010 plant height
9 AQGL014 sheath blight disease resistance
10 AQGL008 sheath blight disease resistance
11 AQGL002 sheath blight disease resistance
12 AQDS001 spikelet sterility
13 CQP3 days to heading
14 CQAS38 seed number
15 CQAS37 spikelet number
16 CQAS34 seed number
17 CQAS36 1000-seed weight
18 CQAS33 spikelet density
19 CQAS32 spikelet number
20 AQEI130 leaf senescence
21 AQEI108 leaf senescence
22 AQEI006 leaf senescence
23 AQEI005 leaf senescence
24 AQFC001 elongation ability
25 CQE15 chlorophyll content
26 AQBI004 pollen fertility
27 CQAR8 spikelet density
28 CQAR7 tiller number
29 AQDQ027 panicle length
30 AQDQ026 plant height
31 AQDQ025 plant height
32 AQDQ024 plant height
33 AQCN005 days to heading
34 CQAX17 plant height
35 CQAX32 plant height
36 AQEN003 blast disease resistance
37 AQFF025 days to flower
38 AQFF026 days to flower
39 AQFF024 days to flower
40 AQFF022 days to flower
41 AQFF023 days to flower
42 AQFF021 harvest index
43 AQFF019 harvest index
44 AQFF018 harvest index
45 AQFF017 harvest index
46 AQFF016 harvest index
47 CQAE2 days to heading

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000518 seedling development stage (+)
2 PO:0007022 imbibition (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0009005 root (+)
2 PO:0009006 shoot system (+)
3 PO:0009010 seed (+)
4 PO:0020039 leaf lamina (+)
5 PO:0020104 leaf sheath (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
S. No. TO Id TO Description Presence(+) or absence(-) of gene expression /activity
1 MCT:1000038 catalase (CAT) activity (+)

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Kumar Amit; Singh Rana Pratap; Singh Pradyumna Kumar; Awasthi Surabhi; Chakrabarty Debasis; Trivedi Prabodh Kumar; Tripathi Rudra Deo; Selenium ameliorates arsenic induced oxidative stress through modulation of antioxidant enzymes and thiols in rice (Oryza sativa L.). Ecotoxicology (London, England) 2014:23
PMID [24985886]


Nair Prakash M Gopalakrishnan; Chung Ill Min; Physiological and molecular level effects of silver nanoparticles exposure in rice (Oryza sativa L.) seedlings. Chemosphere 2014:112
PMID [25048895]


Ye Nenghui; Li Haoxuan; Zhu Guohui; Liu Yinggao; Liu Rui; Xu Weifeng; Jing Yu; Peng Xinxiang; Zhang Jianhua; Copper Suppresses Abscisic Acid Catabolism and Catalase Activity and Inhibits Seed Germination of Rice. Plant & cell physiology 2014:
PMID [25273891]


Fukao Takeshi; Yeung Elaine; Bailey-Serres Julia; The Submergence Tolerance Regulator SUB1A Mediates Crosstalk between Submergence and Drought Tolerance in Rice. The Plant Cell 2011:23
PMID [21239643]


Ye Nenghui; Zhu Guohui; Liu Yinggao; Li Yingxuan; Zhang Jianhua; ABA controls H₂O₂ accumulation through the induction of OsCATB in rice leaves under water stress. Plant & cell physiology 2011:52
PMID [21398647]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India