Rice gene details
Searching for LOC_Os03g05310 [pheophorbide a oxygenase, chloroplast precursor, putative, expressed ]

Functional details
Molecular Function
Not found
1 GO:0005488 binding (RGAP)
2 GO:0003824 catalytic activity (RGAP)
Biological process
Not found
1 GO:0000003 reproduction (RGAP)
2 GO:0008219 cell death (RGAP)
3 GO:0008152 metabolic process (RGAP)
4 GO:0006950 response to stress (RGAP)
5 GO:0009607 response to biotic stimulus (RGAP)
6 GO:0009908 flower development (RGAP)
7 GO:0009987 cellular process (RGAP)
8 GO:0009056 catabolic process (RGAP)
Cellular component
Not found
1 GO:0016020 membrane (RGAP)
2 GO:0009536 plastid (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007196 light regimen (+)
2 MCE:1000203 dark regimen (+)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 AQFU015 amylose content
2 AQGA007 amylose content
3 AQR012 deep root dry weight
4 CQAI15 tiller number
5 AQEA032 plant height
6 AQEA033 plant height
7 AQEA031 plant height
8 AQBC090 leaf width
9 AQBC091 leaf width
10 AQBC011 plant height
11 AQBC010 plant height
12 AQGL014 sheath blight disease resistance
13 AQGL008 sheath blight disease resistance
14 AQGL002 sheath blight disease resistance
15 AQDS001 spikelet sterility
16 CQP3 days to heading
17 CQAS38 seed number
18 CQAS37 spikelet number
19 CQAS34 seed number
20 CQAS36 1000-seed weight
21 CQAS33 spikelet density
22 CQAS32 spikelet number
23 AQEI130 leaf senescence
24 AQEI108 leaf senescence
25 AQFC001 elongation ability
26 CQE15 chlorophyll content
27 CQAR8 spikelet density
28 CQAR7 tiller number
29 AQDQ027 panicle length
30 AQDQ026 plant height
31 AQDQ025 plant height
32 AQDQ024 plant height
33 AQCN005 days to heading
34 CQAX17 plant height
35 CQAX32 plant height
36 AQEN003 blast disease resistance

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000316 third leaf from base (+)
2 PO:0009025 vascular leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

1  Yamatani Hiroshi; Sato Yutaka; Masuda Yu; Kato Yusuke; Morita Ryouhei; Fukunaga Kenji; Nagamura Yoshiaki; Nishimura Minoru; Sakamoto Wataru; Tanaka Ayumi; Kusaba Makoto; NYC4, the rice ortholog of Arabidopsis THF1, is involved in the degradation of chlorophyll-protein complexes during leaf senescence. The Plant journal 2013:
PMID [23432654]


2  Pitakrattananukool Sugunya; Kawakatsu Taiji; Anuntalabhochai Somboon; Takaiwa Fumio; Overexpression of OsRab7B3, a small GTP-binding protein gene, enhances leaf senescence in transgenic rice. Bioscience, Biotechnology, and Biochemistry 2012:76
PMID [22785493]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India