Rice gene details
Searching for LOC_Os03g10850 [FAD-linked sulfhydryl oxidase ALR, putative, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os03g10850.1 195 81 174 PF04777.5 Evr1_Alr
2 LOC_Os03g10850.2 123 81 109 PF04777.5 Evr1_Alr
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  2
N22InfloresenceFC
  1
N22 Root FC
  -3
IR64 Flag-leaf FC
  2
IR64InfloresenceFC
  1
IR64 Root FC
  3

Functional details
Molecular Function
Not found
1 GO:0005515 protein binding (RGAP)
2 GO:0005488 binding (RGAP)
3 GO:0003824 catalytic activity (RGAP)
Biological process
Not found
1 GO:0008152 metabolic process (RGAP)
Cellular component
Not found
1 GO:0005739 mitochondrion (RGAP)

Environment details
Not found

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 AQDI004 hybrid incompatibilty
2 AQDK007 grain yield
3 AQCU106 spikelet fertility
4 AQBX006 panicle weight
5 AQBX025 panicle weight
6 AQEE021 crushed grain percentage
7 CQX11 panicle length
8 AQDL002 stomatal resistance
9 AQFU015 amylose content
10 CQAS38 seed number
11 CQAS37 spikelet number
12 CQAS34 seed number
13 CQAS36 1000-seed weight
14 CQAS33 spikelet density
15 CQAS32 spikelet number
16 AQFC001 elongation ability
17 CQE15 chlorophyll content
18 CQAR8 spikelet density
19 CQAR7 tiller number

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000518 seedling development stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0009005 root (+)
2 PO:0025034 leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Liang Xuejiao; Qin Lu; Liu Peiwei; Wang Meihuan; Ye Hong; Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37
PMID [24028141]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India