|
Searching for LOC_Os03g18850
[pathogenesis-related Bet v I family protein, putative, expressed ] |
|
|
Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os03g18850.1 |
161 |
2 |
155 |
PF00407.11 |
Bet_v_I |
|
The basic information is from RGAP and Pfam/InterPro databases |
|
|
Gene model (download) 
IR64 N22
|
Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
|
N22InfloresenceFC |
|
N22 Root FC |
|
IR64 Flag-leaf FC |
|
IR64InfloresenceFC |
|
IR64 Root FC |
|
|
|
Functional details
Molecular Function
Biological process
Cellular component
S. No. |
GO Id |
GO Description |
|
|
Environment details
Metabolic Pathway details
QTL details
|
Plant developmental stage / tissue details
Plant development stage
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
|
Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
|
|
Related publications [Sorted by year] |
|
1 |
Kim Sun Tae; Yu Seok; Kang Young Hyun; Kim Sang Gon; Kim Jae-Yean; Kim Sun-Hyung; Kang Kyu Young; The rice pathogen-related protein 10 (JIOsPR10) is induced by abiotic and biotic stresses and exhibits ribonuclease activity. Plant cell reports 2008:27
PMID [18074138]
 |
|
|
2 |
Huang Limin; Sun Qianwen; Qin Fujun; Li Chen; Zhao Yu; Zhou Dao-Xiu; Down-regulation of a SILENT INFORMATION REGULATOR2-related histone deacetylase gene, OsSRT1, induces DNA fragmentation and cell death in rice. Plant Physiology 2007:144
PMID [17468215]
 |
|
|
3 |
Jwa N S; Kumar Agrawal G; Rakwal R; Park C H; Prasad Agrawal V; Molecular cloning and characterization of a novel Jasmonate inducible pathogenesis-related class 10 protein gene, JIOsPR10, from rice (Oryza sativa L.) seedling leaves. Biochemical and biophysical research communications 2001:286
PMID [11527396]
 |
|
|
|