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Searching for LOC_Os03g40270
[alpha-1,4-glucan-protein synthase, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os03g40270.1 |
365 |
13 |
356 |
PF03214.5 |
RGP |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Biological process
Not found |
1 |
GO:0006139 |
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process |
(RGAP) |
2 |
GO:0005975 |
carbohydrate metabolic process |
(RGAP) |
3 |
GO:0007275 |
multicellular organismal development |
(RGAP) |
4 |
GO:0008152 |
metabolic process |
(RGAP) |
5 |
GO:0009987 |
cellular process |
(RGAP) |
6 |
GO:0008150 |
biological_process |
(RGAP) |
7 |
GO:0006950 |
response to stress |
(RGAP) |
8 |
GO:0009628 |
response to abiotic stimulus |
(RGAP) |
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Cellular component
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Environment details
Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000567 |
0-1 mm floret length stage |
(-) |
2 |
MCP:1000568 |
1-2 mm floret length stage |
(-) |
3 |
MCP:1000569 |
2-4 mm floret length stage |
(-) |
4 |
MCP:1000570 |
4-6 mm floret length stage |
(-) |
5 |
MCP:1000571 |
6-7 mm floret length stage |
(-) |
6 |
MCP:1000572 |
7 mm floret length stage |
(-) |
7 |
PO:0001052 |
2 leaf expansion stage |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Sumiyoshi Minako; Inamura Takuya; Nakamura Atsuko; Aohara Tsutomu; Ishii Tadashi; Satoh Shinobu; Iwai Hiroaki; UDP-Arabinopyranose Mutase 3 is Required for Pollen Wall Morphogenesis in Rice (Oryza sativa). Plant & cell physiology 2015:56
PMID [25261533]
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