Rice gene details
Searching for LOC_Os03g55800 [cytochrome P450, putative, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os03g55800.1 513 341 440 PF00067.14 p450
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  3
N22InfloresenceFC
  -1
N22 Root FC
  -7
IR64 Flag-leaf FC
  2
IR64InfloresenceFC
  3
IR64 Root FC
  -1

Functional details
Molecular Function
Not found
1 GO:0003824 catalytic activity (RGAP)
2 GO:0019825 oxygen binding (RGAP)
Biological process
Not found
1 GO:0009607 response to biotic stimulus (RGAP)
2 GO:0009987 cellular process (RGAP)
3 GO:0006629 lipid metabolic process (RGAP)
4 GO:0006950 response to stress (RGAP)
5 GO:0009719 response to endogenous stimulus (RGAP)
6 GO:0009058 biosynthetic process (RGAP)
Cellular component
Not found
1 GO:0016020 membrane (RGAP)
2 GO:0009536 plastid (RGAP)
3 GO:0009579 thylakoid (RGAP)
4 GO:0005739 mitochondrion (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007279 Chilo suppressalis (+)

Metabolic Pathway details
S. No. Pathway Id Pathway Description
1 PWY-735 jasmonic acid biosynthesis

QTL details
S. No. QTL Id QTL Associated Trait
1 CQE18 yield
2 CQE26 carbon content
3 CQE27 grain number
4 CQF5 soluble protein content

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000518 seedling development stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0000003 whole plant (+)
2 PO:0008037 seedling (+)
3 PO:0009047 stem (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Lourenço Tiago F; Serra Tânia S; Cordeiro André M; Swanson Sarah J; Gilroy Simon; Saibo Nelson J M; Oliveira M Margarida; The Rice E3-Ubiquitin Ligase HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Modulates the Expression of ROOT MEANDER CURLING, a Gene Involved in Root Mechanosensing, through the Interaction with Two ETHYLENE-RESPONSE FACTOR Transcription Factors. Plant physiology 2015:169
PMID [26381316]


Wang Qi; Li Jiancai; Hu Lingfei; Zhang Tongfang; Zhang Guren; Lou Yonggen; OsMPK3 positively regulates the JA signaling pathway and plant resistance to a chewing herbivore in rice. Plant Cell Reports 2013:
PMID [23344857]


Lu Jing; Ju Hongping; Zhou Guoxin; Zhu Chuanshu; Erb Matthias; Wang Xiaopeng; Wang Peng; Lou Yonggen; An EAR-motif-containing ERF transcription factor affects herbivore-induced signaling, defense and resistance in rice. The Plant Journal 2011:
PMID [21831212]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India