Rice gene details
Searching for LOC_Os04g30240 [OsWAK60 - OsWAK receptor-like protein kinase, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os04g30240.1 758 436 633 PF00069.17 Pkinase
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  3
N22InfloresenceFC
 
N22 Root FC
  2
IR64 Flag-leaf FC
  1
IR64InfloresenceFC
 
IR64 Root FC
  -2

Functional details
Molecular Function
Not found
1 GO:0016301 kinase activity (RGAP)
2 GO:0000166 nucleotide binding (RGAP)
3 GO:0005488 binding (RGAP)
Biological process
Not found
1 GO:0016043 cellular component organization (RGAP)
2 GO:0009653 anatomical structure morphogenesis (RGAP)
3 GO:0016049 cell growth (RGAP)
4 GO:0006464 protein modification process (RGAP)
5 GO:0009791 post-embryonic development (RGAP)
Cellular component
Not found
1 GO:0005886 plasma membrane (RGAP)

Environment details
Not found

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 AQCK008 days to heading
2 AQDO005 invitro regeneration ability
3 AQDO009 invitro regeneration ability
4 AQDZ001 lodging incidence
5 CQE28 days to heading
6 CQN14 soluble protein content
7 AQED007 days to maturity
8 CQE29 space
9 CQE30 space to culm ratio
10 AQFE053 panicle length
11 AQFE095 plant height
12 AQFE112 awn length
13 AQE052 100-seed weight
14 AQE053 100-seed weight
15 AQGI013 root dry weight
16 AQGI262 total biomass yield
17 AQCN008 days to heading
18 AQCN026 rice yellow mottle virus resistance
19 AQDQ041 panicle length
20 CQAO19 seed weight
21 CQAW15 tiller number
22 AQDQ040 panicle length
23 AQCU260 spikelet fertility
24 AQFR007 seedling vigor
25 AQFW156 leaf width
26 AQFW206 leaf length
27 AQFF060 panicle number
28 AQFT007 root penetration index
29 CQH19 root penetration index
30 AQBK007 seed number
31 CQC4 grain number
32 AQBK005 spikelet number
33 CQC3 spikelet number
34 AQBK014 days to heading
35 AQFE106 grain shattering
36 AQF089 basic vegetative phase
37 AQF097 KClO3 resistance
38 AQF137 mesocotyl length

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000518 seedling development stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0009005 root (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Redillas Mark C F R; Jeong Jin S; Kim Youn S; Jung Harin; Bang Seung W; Choi Yang D; Ha Sun-Hwa; Reuzeau Christophe; Kim Ju-Kon; The overexpression of OsNAC9 alters the root architecture of rice plants enhancing drought resistance and grain yield under field conditions. Plant biotechnology journal 2012:10
PMID [22551450]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India