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Searching for LOC_Os04g38570
[multidrug resistance protein, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os04g38570.1 |
1260 |
44 |
323 |
PF00664.15 |
ABC_membrane |
2 |
LOC_Os04g38570.1 |
1260 |
398 |
582 |
PF00005.19 |
ABC_tran |
3 |
LOC_Os04g38570.1 |
1260 |
694 |
970 |
PF00664.15 |
ABC_membrane |
4 |
LOC_Os04g38570.1 |
1260 |
1045 |
1229 |
PF00005.19 |
ABC_tran |
5 |
LOC_Os04g38570.2 |
990 |
128 |
312 |
PF00005.19 |
ABC_tran |
6 |
LOC_Os04g38570.2 |
990 |
424 |
700 |
PF00664.15 |
ABC_membrane |
7 |
LOC_Os04g38570.2 |
990 |
775 |
959 |
PF00005.19 |
ABC_tran |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Biological process
Cellular component
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007069 |
gibberellic acid regimen |
(+) |
2 |
EO:0007070 |
indole acetic acid regimen |
(+) |
3 |
EO:0007105 |
abscisic acid regimen |
(+) |
4 |
EO:0007180 |
2,4-dichlorophenoxyacetic acid |
(+) |
5 |
EO:0007187 |
salicylic acid regimen |
(+) |
6 |
EO:0007291 |
benzyladenine regimen |
(+) |
7 |
MCE:1000143 |
iron deficiency treatment |
(+) |
8 |
MCE:1000239 |
1-naphthylphthalamic acid (NPA) |
(+) |
9 |
MCE:1000240 |
1-naphthoxyacetic acids (1-NOA) |
(+) |
10 |
MCE:1000332 |
naphthylacetic acid (NAA) |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
2 |
PO:0007001 |
FR.01 early stage of fruit ripening |
(+) |
3 |
PO:0007014 |
booting |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Wang Suikang; Xu Yanxia; Li Zhilan; Zhang Saina; Lim Jae-Min; Lee Kyun Oh; Li Chuanyou; Qian Qian; Jiang Dean; Qi Yanhua; OsMOGS is required for N-glycan formation and auxin-mediated root development in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:
PMID [24597623]
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2 |
Xu Yanxia; Zhang Saina; Guo Haipeng; Wang Suikang; Xu Ligen; Li Chuanyou; Qian Qian; Chen Fan; Geisler Markus; Qi Yanhua; Jiang De An; OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79
PMID [24798203]
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