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Searching for LOC_Os04g39020
[aldehyde dehydrogenase, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os04g39020.1 |
506 |
18 |
487 |
PF00171.14 |
Aldedh |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0003824 |
catalytic activity |
(RGAP) |
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Biological process
Cellular component
S. No. |
GO Id |
GO Description |
1 |
GO:0005777 |
peroxisome |
(RGAP) |
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Environment details
Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
2 |
MCP:1000588 |
flower-15cm long, stage |
(+) |
3 |
PO:0001053 |
3 leaf fully expanded |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Tang Wei; Sun Jiaqi; Liu Jia; Liu Fangfang; Yan Jun; Gou Xiaojun; Lu Bao-Rong; Liu Yongsheng; RNAi-directed downregulation of betaine aldehyde dehydrogenase 1 (OsBADH1) results in decreased stress tolerance and increased oxidative markers without affecting glycine betaine biosynthesis in rice (Oryza sativa). Plant molecular biology 2014:86
PMID [25150410]
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2 |
Gao Chenxi; Han Bin; Evolutionary and expression study of the aldehyde dehydrogenase (ALDH) gene superfamily in rice (Oryza sativa). Gene 2009:431
PMID [19071198]
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3 |
Niu Xiangli; Tang Wei; Huang Weizao; Ren Guangjun; Wang Qilin; Luo Di; Xiao Yingyong; Yang Shimei; Wang Feng; Lu Bao-Rong; Gao Fangyuan; Lu Tiegang; Liu Yongsheng; RNAi-directed downregulation of OsBADH2 results in aroma (2-acetyl-1-pyrroline) production in rice (Oryza sativa L.). BMC Plant Biology 2008:8
PMID [18840300]
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