Rice gene details
Searching for LOC_Os04g44150 [gibberellin 2-beta-dioxygenase 7, putative, expressed ]


Functional details
Molecular Function
S. No. GO Id GO Description
1 GO:0003824 catalytic activity (RGAP)
Biological process
S. No. GO Id GO Description
1 GO:0009987 cellular process (RGAP)
2 GO:0006629 lipid metabolic process (RGAP)
3 GO:0008152 metabolic process (RGAP)
Cellular component
S. No. GO Id GO Description
1 GO:0005634 nucleus  
2 GO:0005737 cytoplasm  
3 GO:0005575 cellular_component (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007069 gibberellic acid regimen (+)
2 MCE:1000169 GA4 gibberellin (+)
3 MCE:1000170 paclobutrazol (PBZ) (+)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 CQN14 soluble protein content
2 AQE052 100-seed weight
3 AQE053 100-seed weight
4 AQBK005 spikelet number
5 CQC3 spikelet number
6 AQBK014 days to heading
7 AQGD017 grain shattering
8 AQGD023 hull color
9 AQGD025 hull color
10 AQGD027 hull color
11 CQX13 panicle length
12 CQX16 internode length
13 AQFA016 grain length to width ratio
14 CQAP2 scent
15 CQAX33 plant height
16 AQCU126 plant height
17 AQCU150 panicle length
18 AQCU162 spikelet number
19 AQCU223 leaf width
20 AQFE110 germination speed
21 CQAE9 plant height
22 AQFF066 panicle number
23 AQFF047 panicle number
24 AQFF052 panicle number
25 CQAS44 panicle number
26 CQAS46 spikelet density
27 CQAS47 seed number
28 CQAS49 1000-seed weight
29 CQAS51 seed number
30 CQAX21 plant height
31 CQE31 carbon content
32 CQE32 chlorophyll content
33 CQF6 soluble protein content
34 AQAB062 large vascular bundle number
35 AQAE002 chlorophyll content
36 AQAE003 chlorophyll content
37 AQAI020 large vascular bundle number
38 AQGI141 biomass yield
39 AQGI227 total biomass yield
40 AQHR037 plant height
41 AQCQ003 grain yield per plant
42 AQP011 spikelet number
43 AQP018 panicle length
44 AQFP034 culm length
45 CQAN18 plant height
46 CQB10 grain number
47 CQB9 plant height
48 CQAC2 blast disease resistance
49 AQCF031 spikelet fertility
50 AQCI011 phosphorus sensitivity
51 AQFF008 total biomass yield
52 AQDO008 invitro regeneration ability
53 AQFF031 spikelet number
54 AQFF036 spikelet number
55 AQFE015 days to heading
56 CQAW13 tiller number
57 AQFE031 grain number
58 AQFE059 seed set percent
59 AQFE060 seed set percent
60 AQFE061 seed set percent

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000204 5 days post-anthesis stage (+)
2 MCP:1000330 pre-anthesis stage (+)
3 MCP:1000376 15 days post-anthesis stage (+)
4 MCP:1000454 10 days post-anthesis stage (+)
5 MCP:1000473 20 days post-anthesis stage (+)
6 MCP:1000477 25 days post-anthesis stage (+)
7 MCP:1000505 30 days post-anthesis stage (+)
8 MCP:1000518 seedling development stage (+)
9 PO:0007022 imbibition (+)
10 PO:0007616 4 anthesis (+)
11 PO:0007617 5 post anthesis (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000096 first shoot internode (+)
2 MCP:1000230 third leaf from top (+)
3 MCP:1000234 second leaf from newly emerging leaf (+)
4 MCP:1000237 second shoot internode (+)
5 MCP:1000315 second leaf from base (+)
6 PO:0000003 whole plant (+)
7 PO:0006339 juvenile leaf (+)
8 PO:0008037 seedling (+)
9 PO:0008041 stem internode elongation zone (+)
10 PO:0009005 root (+)
11 PO:0009006 shoot system (+)
12 PO:0009010 seed (+)
13 PO:0009049 inflorescence (+)
14 PO:0020033 coleoptile (-)
15 PO:0020039 leaf lamina (+)
16 PO:0020103 flag leaf (+)
17 PO:0020104 leaf sheath (+)
18 PO:0020142 stem internode (+)
19 PO:0025034 leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
S. No. TO Id TO Description Presence(+) or absence(-) of gene expression /activity
1 TO:0000019 seedling height (+)
2 TO:0000145 internode length (+)
3 TO:0000207 plant height (+)
4 TO:0000299 leaf lamina color (+)
5 TO:0000326 leaf color (+)
6 TO:0000540 leaf area (+)
7 TO:0000576 stem length (+)
8 TO:0002675 gibberellic acid content (+)
9 TO:0002687 cell elongation trait (+)
10 TO:0002689 leaf sheath length (+)

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Liu Yang; Fang Jun; Xu Fan; Chu Jinfang; Yan Cunyu; Schl├Ąppi Michael R; Wang Youping; Chu Chengcai; Expression patterns of ABA and GA metabolism genes and hormone levels during rice seed development and imbibition: a comparison of dormant and non-dormant rice cultivars. Journal of genetics and genomics = Yi chuan xue bao 2014:41
PMID [24976122]


Huang Jian; Tang Ding; Shen Yi; Qin Baoxiang; Hong Lilan; You Aiqing; Li Ming; Wang Xin; Yu Hengxiu; Gu Minghong; Cheng Zhukuan; Activation of gibberellin 2-oxidase 6 decreases active gibberellin levels and creates a dominant semi-dwarf phenotype in rice (Oryza sativa L.). Journal of Genetics and Genomics 2010:37
PMID [20171575]


Yaish Mahmoud W; El-Kereamy Ashraf; Zhu Tong; Beatty Perrin H; Good Allen G; Bi Yong-Mei; Rothstein Steven J; The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice. PLoS genetics 2010:6
PMID [20838584]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India