Rice gene details
Searching for LOC_Os04g44830 [thioredoxin, putative, expressed ]


Functional details
Molecular Function
Not found
1 GO:0030234 enzyme regulator activity (RGAP)
Biological process
Not found
1 GO:0006950 response to stress (RGAP)
2 GO:0009628 response to abiotic stimulus (RGAP)
3 GO:0005975 carbohydrate metabolic process (RGAP)
4 GO:0008152 metabolic process (RGAP)
Cellular component
Not found
1 GO:0005576 extracellular region (RGAP)
2 GO:0009579 thylakoid (RGAP)
3 GO:0009536 plastid (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007196 light regimen (-)
2 MCE:1000203 dark regimen (-)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 CQN14 soluble protein content
2 AQE052 100-seed weight
3 AQE053 100-seed weight
4 AQBK005 spikelet number
5 CQC3 spikelet number
6 AQBK014 days to heading
7 AQGD017 grain shattering
8 AQGD023 hull color
9 AQGD025 hull color
10 AQGD027 hull color
11 CQX13 panicle length
12 CQX16 internode length
13 AQFA016 grain length to width ratio
14 CQAP2 scent
15 CQAX33 plant height
16 AQCU126 plant height
17 AQCU150 panicle length
18 AQCU162 spikelet number
19 AQCU223 leaf width
20 AQFE110 germination speed
21 CQAE9 plant height
22 AQFF066 panicle number
23 AQFF047 panicle number
24 AQFF052 panicle number
25 CQAS44 panicle number
26 CQAS46 spikelet density
27 CQAS47 seed number
28 CQAS49 1000-seed weight
29 CQAS51 seed number
30 CQAX21 plant height
31 AQAB062 large vascular bundle number
32 AQAE002 chlorophyll content
33 AQAE003 chlorophyll content
34 AQAI020 large vascular bundle number
35 AQGI141 biomass yield
36 AQGI227 total biomass yield
37 AQHR037 plant height
38 AQCQ003 grain yield per plant
39 AQP011 spikelet number
40 AQP018 panicle length
41 AQFP034 culm length
42 CQAN18 plant height
43 CQB10 grain number
44 CQB9 plant height
45 CQAC2 blast disease resistance
46 AQCF031 spikelet fertility
47 AQCI011 phosphorus sensitivity
48 AQFF008 total biomass yield
49 AQDO008 invitro regeneration ability
50 AQFF031 spikelet number
51 AQFF036 spikelet number
52 AQFE015 days to heading
53 CQAW13 tiller number
54 AQFE031 grain number
55 AQFE059 seed set percent
56 AQFE060 seed set percent
57 AQFE061 seed set percent
58 CQE33 shoot elongation rate

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000107 post-germination stage (-)
2 MCP:1000110 1 day pre-heading stage (-)
3 MCP:1000136 5 days pre-heading stage (-)
4 MCP:1000194 inflorescence 4-5cm stage (-)
5 MCP:1000201 14 days post-heading stage (-)
6 MCP:1000250 inflorescenece secondary branch primordium differentiation stage (-)
7 MCP:1000489 3 days post-anthesis stage (-)
8 PO:0007015 radicle emergence (-)
9 PO:0007022 imbibition (-)
10 PO:0007041 inflorescence emergence from flag leaf sheath (-)
11 PO:0007071 2.02 main shoot and axillary shoots visible at two nodes (-)
12 PO:0007106 LP.03 three leaves visible (-)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0000001 embryo proper (-)
2 PO:0005052 plant callus (-)
3 PO:0006000 Poaceae hull (-)
4 PO:0009005 root (-)
5 PO:0009006 shoot system (-)
6 PO:0009010 seed (-)
7 PO:0009025 vascular leaf (-)
8 PO:0009029 stamen (-)
9 PO:0009047 stem (-)
10 PO:0009049 inflorescence (-)
11 PO:0009051 spikelet (-)
12 PO:0020031 radicle (-)
13 PO:0020032 plumule (-)
14 PO:0020103 flag leaf (-)
15 PO:0020104 leaf sheath (-)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Nuruzzaman Mohammed; Gupta Madhur; Zhang Chengjun; Wang Lei; Xie Weibo; Xiong Lizhong; Zhang Qifa; Lian Xingming; Sequence and expression analysis of the thioredoxin protein gene family in rice. Molecular genetics and genomics 2008:280
PMID [18491141]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India