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Searching for LOC_Os05g15770
[glycosyl hydrolase, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os05g15770.1 |
298 |
25 |
194 |
PF00704.20 |
Glyco_hydro_18 |
2 |
LOC_Os05g15770.1 |
298 |
266 |
279 |
PF00704.20 |
Glyco_hydro_18 |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Biological process
Cellular component
S. No. |
GO Id |
GO Description |
1 |
GO:0005623 |
cell |
(RGAP) |
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007048 |
sodium chloride regimen |
(+) |
2 |
EO:0007332 |
cold air temperature regimen |
(+) |
3 |
MCE:1000016 |
polyethylene glycol (PEG) treatment |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
Plant tissue/organ
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
PO:0009005 |
root |
(+) |
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Guo X L; Bai L R; Su C Q; Shi L R; Wang D W; Molecular cloning and expression of drought-induced protein 3 (DIP3) encoding a class III chitinase in upland rice. Genetics and molecular research : GMR 2013:12
PMID [24391034]
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