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Searching for LOC_Os05g25770
[OsWRKY45 - Superfamily of TFs having WRKY and zinc finger domains, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os05g25770.1 |
327 |
117 |
179 |
PF03106.7 |
WRKY |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0003700 |
sequence-specific DNA binding transcription factor activity |
(RGAP) |
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Biological process
Cellular component
S. No. |
GO Id |
GO Description |
1 |
GO:0005730 |
nucleolus |
(RGAP) |
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Environment details
Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
2 |
MCP:1000520 |
young inflorescence stage |
(+) |
3 |
MCP:1000521 |
mature plant stage |
(-) |
4 |
PO:0007065 |
LP.05 five leaves visible |
(+) |
5 |
PO:0007115 |
LP.04 four leaves visible |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Sun Lijun; Zhang Huijuan; Li Dayong; Huang Lei; Hong Yongbo; Ding Xin Shun; Nelson Richard S; Zhou Xueping; Song Fengming; Functions of rice NAC transcriptional factors, ONAC122 and ONAC131, in defense responses against Magnaporthe grisea. Plant Molecular Biology 2012:
PMID [23103994]
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2 |
Yang Xi; Yang Ya-Nan; Xue Liang-Jiao; Zou Mei-Juan; Liu Jian-Jing; Chen Fan; Xue Hong-Wei; Rice ABI5-like1 Regulates ABA and Auxin Responses by Affecting the Expression of ABRE-Containing Genes. Plant Physiology 2011:
PMID [21546455]
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3 |
Tao Zeng; Kou Yanjun; Liu Hongbo; Li Xianghua; Xiao Jinghua; Wang Shiping; OsWRKY45 alleles play different roles in abscisic acid signalling and salt stress tolerance but similar roles in drought and cold tolerance in rice. Journal of experimental botany 2011:62
PMID [21725029]
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4 |
Jiang Chang-Jie; Shimono Masaki; Sugano Shoji; Kojima Mikiko; Yazawa Katsumi; Yoshida Riichiro; Inoue Haruhiko; Hayashi Nagao; Sakakibara Hitoshi; Takatsuji Hiroshi; Abscisic acid interacts antagonistically with salicylic acid signaling pathway in rice-Magnaporthe grisea interaction. Molecular plant-microbe interactions : MPMI 2010:23
PMID [20459318]
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5 |
Jiang Chang-Jie; Shimono Masaki; Maeda Satoru; Inoue Haruhiko; Mori Masaki; Hasegawa Morifumi; Sugano Shoji; Takatsuji Hiroshi; Suppression of the rice fatty-acid desaturase gene OsSSI2 enhances resistance to blast and leaf blight diseases in rice. Molecular Plant-Microbe Interactions 2009:22
PMID [19522564]
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6 |
Ramamoorthy Rengasamy; Jiang Shu-Ye; Kumar Nadimuthu; Venkatesh Prasanna Nori; Ramachandran Srinivasan; A comprehensive transcriptional profiling of the WRKY gene family in rice under various abiotic and phytohormone treatments. Plant & Cell Physiology 2008:49
PMID [18413358]
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