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Searching for LOC_Os05g41090
[CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os05g41090.1 |
517 |
13 |
298 |
PF00069.17 |
Pkinase |
2 |
LOC_Os05g41090.1 |
517 |
432 |
460 |
PF00036.24 |
efhand |
3 |
LOC_Os05g41090.1 |
517 |
474 |
502 |
PF00036.24 |
efhand |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Biological process
Cellular component
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007105 |
abscisic acid regimen |
(+) |
2 |
EO:0007198 |
water environment |
(+) |
3 |
EO:0007415 |
hydrogen peroxide |
(+) |
4 |
MCE:1000016 |
polyethylene glycol (PEG) treatment |
(+) |
5 |
MCE:1000028 |
diphenyleneiodonium (DPI) |
(+) |
6 |
MCE:1000103 |
fluridone |
(+) |
7 |
MCE:1000119 |
calcium chloride regimen (CaCl2) |
(+) |
8 |
MCE:1000153 |
lanthanum chloride regimen(LaCl3) |
(+) |
9 |
MCE:1000201 |
ethylene glycol tetraacetic acid (EGTA) |
(+) |
10 |
MCE:1000210 |
N-(6- aminohexyl)-5-chloro-1-naphthalene sulfonamide (W-7) |
(+) |
11 |
MCE:1000245 |
2′-amino-3′-methoxyflavone (PD98059) |
(+) |
12 |
MCE:1000311 |
N-[2-[N-(4-chlorocinnamyl)-N-methylaminomethyl] phenyl]-N-(2-hydroxyethyl)-4-methoxybenzenesulfonamide (KN-93 |
(+) |
13 |
MCE:1000312 |
N-(6-aminohexyl)-1-naphthalene sulfonamide hydrochloride (W5) |
(+) |
14 |
MCE:1000314 |
1,3-Dimethylthiourea (DMTU) |
(+) |
15 |
MCE:1000315 |
o-2,3-dicya1,4-Diaminno-1,4-bis-(o-amino-phenylmercapto)butadiene ethanolate (U0126) |
(+) |
16 |
MCE:1000316 |
2-[N-(4′-methoxybenzenesulfonyl)]amino-N-(4′-chlorophenyl)-2-pro-penyl-N-methyl-benzylamine(KN-92) |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
2 |
PO:0001053 |
3 leaf fully expanded |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Shi Ben; Ni Lan; Liu Yanpei; Zhang Aying; Tan Mingpu; Jiang Mingyi; OsDMI3-mediated activation of OsMPK1 regulates the activities of antioxidant enzymes in abscisic acid signalling in rice. Plant, cell & environment 2014:37
PMID [23777258]
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2 |
Wen Feng; Qin Tingting; Wang Yao; Dong Wen; Zhang Aying; Tan Mingpu; Jiang Mingyi; OsHK3 is a crucial regulator of abscisic acid signaling involved in antioxidant defense in rice. Journal of integrative plant biology 2014:
PMID [24912543]
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3 |
Shi Ben; Ni Lan; Zhang Aying; Cao Jianmei; Zhang Hong; Qin Tingting; Tan Mingpu; Zhang Jianhua; Jiang Mingyi; OsDMI3 is a novel component of abscisic acid signaling in the induction of antioxidant defense in leaves of rice. Molecular plant 2012:5
PMID [22869603]
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