Rice gene details
Searching for LOC_Os06g02019 [cytochrome P450, putative, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os06g02019.1 507 281 475 PF00067.14 p450
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  -1
N22InfloresenceFC
  -8
N22 Root FC
  3
IR64 Flag-leaf FC
  -2
IR64InfloresenceFC
  -1
IR64 Root FC
  -2

Functional details
Molecular Function
Not found
1 GO:0003824 catalytic activity (RGAP)
2 GO:0019825 oxygen binding (RGAP)
Biological process
Not found
1 GO:0008152 metabolic process (RGAP)
2 GO:0009058 biosynthetic process (RGAP)
3 GO:0009987 cellular process (RGAP)
4 GO:0006629 lipid metabolic process (RGAP)
Cellular component
Not found
1 GO:0005783 endoplasmic reticulum (RGAP)

Environment details
Not found

Metabolic Pathway details
S. No. Pathway Id Pathway Description
1 PWY-1782 IAA conjugate biosynthesis II
2 PWY-5034 GA12 biosynthesis

QTL details
S. No. QTL Id QTL Associated Trait
1 CQAE17 grain number
2 AQGA003 amylose content
3 AQGA008 amylose content
4 AQGA022 gel consistency
5 AQGA026 gel consistency

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0007022 imbibition (+)
2 PO:0007115 LP.04 four leaves visible (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0000003 whole plant (+)
2 PO:0008037 seedling (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Wu Jiahe; Zhu Chuanfeng; Pang Jinhuan; Zhang Xiangrong; Yang Chunlin; Xia Guixian; Tian Yingchuan; He Chaozu; OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of gibberellin biosynthesis in Oryza sativa. The Plant journal : for cell and molecular biology 2014:80
PMID [25353370]


Li Juan; Jiang Jiafu; Qian Qian; Xu Yunyuan; Zhang Cui; Xiao Jun; Du Cheng; Luo Wei; Zou Guoxing; Chen Mingluan; Huang Yunqing; Feng Yuqi; Cheng Zhukuan; Yuan Ming; Chong Kang; Mutation of Rice BC12/GDD1, Which Encodes a Kinesin-Like Protein That Binds to a GA Biosynthesis Gene Promoter, Leads to Dwarfism with Impaired Cell Elongation. The Plant Cell 2011:23
PMID [21325138]


Qi Weiwei; Sun Fan; Wang Qianjie; Chen Mingluan; Huang Yunqing; Feng Yu-Qi; Luo Xiaojin; Yang Jinshui; Rice ethylene-response AP2/ERF factor OsEATB restricts internode elongation by down-regulating a gibberellin biosynthetic gene. Plant Physiology 2011:157
PMID [21753115]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India