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Searching for LOC_Os06g02040
[late embryogenesis abundant group 1, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os06g02040.1 |
104 |
1 |
73 |
PF03760.7 |
LEA_1 |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
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Biological process
Cellular component
S. No. |
GO Id |
GO Description |
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007048 |
sodium chloride regimen |
(+) |
2 |
EO:0007173 |
warm/hot temperature regimen |
(+) |
3 |
EO:0007222 |
UV light regimen |
(+) |
4 |
EO:0007288 |
magnesium nutrient regimen |
(+) |
5 |
MCE:1000078 |
potassium chloride regimen (KCl) |
(+) |
6 |
MCE:1000119 |
calcium chloride regimen (CaCl2) |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
Plant tissue/organ
Others
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Trait details
S. No. |
TO Id |
TO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCT:1000074 |
cell viability |
(+) |
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Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Hu Tingzhang; Zeng Hua; He Shuai; Wu Yingmei; Wang Guixue; Huang Xiaoyun; Molecular analysis of OsLEA4 and its contributions to improve E. coli viability. Applied biochemistry and biotechnology 2012:166
PMID [22057936]
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