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Searching for LOC_Os06g11290
[12-oxophytodienoate reductase, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os06g11290.1 |
381 |
15 |
346 |
PF00724.12 |
Oxidored_FMN |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0016629 |
12-oxophytodienoate reductase activity |
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2 |
GO:0003824 |
catalytic activity |
(RGAP) |
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Biological process
Cellular component
S. No. |
GO Id |
GO Description |
1 |
GO:0005829 |
cytosol |
(RGAP) |
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Environment details
Metabolic Pathway details
S. No. |
Pathway Id |
Pathway Description |
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1 |
LIPAS-PWY |
triacylglycerol degradation |
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QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
S. No. |
TO Id |
TO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
TO:0000437 |
male sterility |
(+) |
2 |
TO:0002668 |
jasmonic acid content |
(+) |
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Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Kim Yoon-Ha; Khan Abdul Latif; Waqas Muhammad; Jeong Hee-Jeong; Kim Duk-Hwan; Shin Jeong Sheop; Kim Jong-Guk; Yeon Myung-Hun; Lee In-Jung; Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127
PMID [24840865]
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2 |
Lu Jing; Ju Hongping; Zhou Guoxin; Zhu Chuanshu; Erb Matthias; Wang Xiaopeng; Wang Peng; Lou Yonggen; An EAR-motif-containing ERF transcription factor affects herbivore-induced signaling, defense and resistance in rice. The Plant Journal 2011:
PMID [21831212]
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3 |
Tani Tomoyuki; Sobajima Hiroyuki; Okada Kazunori; Chujo Tetsuya; Arimura Shin-Ichi; Tsutsumi Nobuhiro; Nishimura Mikio; Seto Hideharu; Nojiri Hideaki; Yamane Hisakazu; Identification of the OsOPR7 gene encoding 12-oxophytodienoate reductase involved in the biosynthesis of jasmonic acid in rice. Planta 2008:227
PMID [17938955]
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4 |
Sobajima Hiroyuki; Takeda Masayoshi; Sugimori Miho; Kobashi Nobuyuki; Kiribuchi Kyoko; Cho Eun-Min; Akimoto Chiharu; Yamaguchi Takeshi; Minami Eiichi; Shibuya Naoto; Schaller Florian; Weiler Elmar W; Yoshihara Teruhiko; Nishida Hiromi; Nojiri Hideaki; Omori Toshio; Nishiyama Makoto; Yamane Hisakazu; Cloning and characterization of a jasmonic acid-responsive gene encoding 12-oxophytodienoic acid reductase in suspension-cultured rice cells. Planta 2003:216
PMID [12569412]
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