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Searching for LOC_Os06g20340
[dual specificity protein phosphatase, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os06g20340.1 |
282 |
56 |
189 |
PF00782.12 |
DSPc |
2 |
LOC_Os06g20340.2 |
203 |
36 |
110 |
PF00782.12 |
DSPc |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0016787 |
hydrolase activity |
(RGAP) |
2 |
GO:0005515 |
protein binding |
(RGAP) |
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Biological process
Cellular component
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007105 |
abscisic acid regimen |
(+) |
2 |
EO:0007404 |
drought environment |
(+) |
3 |
EO:0007415 |
hydrogen peroxide |
(+) |
4 |
MCE:1000016 |
polyethylene glycol (PEG) treatment |
(+) |
5 |
MCE:1000075 |
recovery treatment |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
PO:0001053 |
3 leaf fully expanded |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Li Yuge; Feng Dongru; Zhang Deli; Su Jianbin; Zhang Yang; Li Zhangqun; Mu Peiqiang; Liu Bing; Wang Hongbin; Wang Jinfa; Rice MAPK phosphatase IBR5 negatively regulates drought stress tolerance in transgenic Nicotiana tabacum. Plant science 2012: 188-189
PMID [22525239]
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