Rice gene details
Searching for LOC_Os07g01020 [SOR/SNZ family protein, putative, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os07g01020.1 319 30 237 PF01680.9 SOR_SNZ
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  2
N22InfloresenceFC
  1
N22 Root FC
  -1
IR64 Flag-leaf FC
  2
IR64InfloresenceFC
  1
IR64 Root FC
  3

Functional details
Molecular Function
Not found
1 GO:0005515 protein binding (RGAP)
Biological process
Not found
1 GO:0009058 biosynthetic process (RGAP)
2 GO:0009987 cellular process (RGAP)
3 GO:0006950 response to stress (RGAP)
4 GO:0008152 metabolic process (RGAP)
5 GO:0009628 response to abiotic stimulus (RGAP)
Cellular component
Not found
1 GO:0005623 cell (RGAP)
2 GO:0005829 cytosol (RGAP)
3 GO:0005886 plasma membrane (RGAP)

Environment details
Not found

Metabolic Pathway details
Not found

QTL details
Not found

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000518 seedling development stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0009005 root (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Jeong Jin Seo; Kim Youn Shic; Redillas Mark C F R; Jang Geupil; Jung Harin; Bang Seung Woon; Choi Yang Do; Ha Sun-Hwa; Reuzeau Christophe; Kim Ju-Kon; OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012:
PMID [23094910]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India