Rice gene details
Searching for LOC_Os08g25380 [serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os08g25380.1 1215 33 77 PF08263.4 LRRNT_2
2 LOC_Os08g25380.1 1215 158 183 PF00560.25 LRR_1
3 LOC_Os08g25380.1 1215 205 226 PF00560.25 LRR_1
4 LOC_Os08g25380.1 1215 254 277 PF00560.25 LRR_1
5 LOC_Os08g25380.1 1215 304 327 PF00560.25 LRR_1
6 LOC_Os08g25380.1 1215 354 376 PF00560.25 LRR_1
7 LOC_Os08g25380.1 1215 454 476 PF00560.25 LRR_1
8 LOC_Os08g25380.1 1215 478 501 PF00560.25 LRR_1
9 LOC_Os08g25380.1 1215 527 549 PF00560.25 LRR_1
10 LOC_Os08g25380.1 1215 551 573 PF00560.25 LRR_1
11 LOC_Os08g25380.1 1215 599 618 PF00560.25 LRR_1
12 LOC_Os08g25380.1 1215 691 713 PF00560.25 LRR_1
13 LOC_Os08g25380.1 1215 715 737 PF00560.25 LRR_1
14 LOC_Os08g25380.1 1215 739 761 PF00560.25 LRR_1
15 LOC_Os08g25380.1 1215 913 1113 PF00069.17 Pkinase
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  2
N22InfloresenceFC
  1
N22 Root FC
  -1
IR64 Flag-leaf FC
  4
IR64InfloresenceFC
  -1
IR64 Root FC
  1

Functional details
Molecular Function
Not found
1 GO:0005515 protein binding (RGAP)
2 GO:0016301 kinase activity (RGAP)
Biological process
Not found
1 GO:0008152 metabolic process (RGAP)
2 GO:0009987 cellular process (RGAP)
3 GO:0006464 protein modification process (RGAP)
Cellular component
Not found
1 GO:0005886 plasma membrane (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007070 indole acetic acid regimen (+)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 AQED011 days to maturity
2 CQX4 days to heading
3 CQN39 leaf senescence
4 CQAU2 spikelet number
5 AQBK019 days to heading
6 AQA009 tiller number
7 CQAP1 scent
8 CQN20 soluble protein content
9 CQN37 leaf senescence
10 CQN38 leaf senescence
11 AQEN008 blast disease resistance
12 AQEN015 blast disease resistance
13 CQAS102 spikelet number
14 CQAS103 seed number
15 CQAS104 yield
16 CQAS92 plant height
17 CQAS93 days to heading
18 CQAS94 days to maturity
19 CQAS97 spikelet number
20 CQAS98 spikelet density
21 CQAS99 seed number
22 AQCF042 filled grain number
23 AQCF043 spikelet number
24 AQDQ051 spikelet number
25 AQDQ052 plant height
26 AQDQ053 panicle length
27 AQDQ054 panicle length
28 CQAX35 plant height
29 CQAS96 panicle number
30 AQBK001 days to heading
31 CQAS100 seed set percent
32 CQAS101 1000-seed weight
33 CQAS95 panicle length
34 CQC6 days to heading
35 AQGD022 awn length
36 CQE65 plant height
37 CQE66 plant height
38 AQGI172 biomass yield
39 CQAJ2 yield
40 AQAL029 root thickness
41 AQFW094 leaf length
42 AQBJ026 primary branch
43 AQBJ029 primary branch
44 AQAP031 brown planthopper resistance
45 AQCU048 spikelet fertility
46 AQCU067 plant height
47 AQFW004 days to heading
48 AQFW040 days to heading
49 AQFW051 leaf width
50 AQFW056 days to heading
51 AQFW065 leaf width
52 AQFW080 days to heading
53 AQCE030 primary branch length
54 AQCE039 primary branch
55 AQFR029 seedling vigor
56 AQAP008 brown planthopper resistance
57 AQAP009 brown planthopper resistance
58 AQAP010 brown planthopper resistance
59 AQAP033 brown planthopper resistance
60 AQCU113 days to heading
61 AQCU174 spikelet fertility
62 AQCU224 leaf width
63 AQFW128 spikelet fertility
64 AQFV020 seedling vigor
65 AQFV021 seedling vigor
66 AQFV022 seedling vigor
67 AQFW035 leaf width

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0008037 seedling (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Sakamoto Tomoaki; Morinaka Yoichi; Inukai Yoshiaki; Kitano Hidemi; Fujioka Shozo; Auxin signal transcription factor regulates expression of brassinosteroid receptor gene in rice. The Plant journal 2012:
PMID [23146214]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India