Rice gene details
Searching for LOC_Os08g27840 [phosphoenolpyruvate carboxylase, putative, expressed ]


Functional details
Molecular Function
Not found
1 GO:0005515 protein binding (RGAP)
2 GO:0003824 catalytic activity (RGAP)
Biological process
Not found
1 GO:0006091 generation of precursor metabolites and energy (RGAP)
2 GO:0009056 catabolic process (RGAP)
3 GO:0009991 response to extracellular stimulus (RGAP)
4 GO:0007154 cell communication (RGAP)
5 GO:0006950 response to stress (RGAP)
6 GO:0016043 cellular component organization (RGAP)
Cellular component
Not found
1 GO:0005576 extracellular region (RGAP)
2 GO:0005829 cytosol (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007024 aerobic environment (+)
2 MCE:1000195 hypoxic environment (+)
3 MCE:1000330 nitrogen flushing (+)

Metabolic Pathway details
S. No. Pathway Id Pathway Description
1 LIPAS-PWY triacylglycerol degradation
2 PWY-5290 secologanin and strictosidine biosynthesis
3 TRNA-CHARGING-PWY tRNA charging pathway

QTL details
S. No. QTL Id QTL Associated Trait
1 CQN39 leaf senescence
2 AQBK019 days to heading
3 CQAP1 scent
4 CQN20 soluble protein content
5 CQN37 leaf senescence
6 CQN38 leaf senescence
7 AQEN008 blast disease resistance
8 AQEN015 blast disease resistance
9 CQAS102 spikelet number
10 CQAS103 seed number
11 CQAS104 yield
12 CQAS92 plant height
13 CQAS93 days to heading
14 CQAS94 days to maturity
15 CQAS97 spikelet number
16 CQAS98 spikelet density
17 CQAS99 seed number
18 AQCF042 filled grain number
19 AQCF043 spikelet number
20 AQDQ051 spikelet number
21 AQDQ052 plant height
22 AQDQ053 panicle length
23 AQDQ054 panicle length
24 CQAX35 plant height
25 CQAS96 panicle number
26 AQBK001 days to heading
27 CQAS100 seed set percent
28 CQAS101 1000-seed weight
29 CQAS95 panicle length
30 CQC6 days to heading
31 AQGD022 awn length
32 CQE65 plant height
33 CQE66 plant height
34 AQAL029 root thickness
35 AQFW094 leaf length
36 AQBJ026 primary branch
37 AQBJ029 primary branch
38 AQAP031 brown planthopper resistance
39 AQCU048 spikelet fertility
40 AQCU067 plant height
41 AQFW004 days to heading
42 AQFW040 days to heading
43 AQFW051 leaf width
44 AQFW056 days to heading
45 AQFW065 leaf width
46 AQFW080 days to heading
47 AQCE030 primary branch length
48 AQCE039 primary branch
49 AQFR029 seedling vigor
50 AQAP008 brown planthopper resistance
51 AQAP009 brown planthopper resistance
52 AQAP010 brown planthopper resistance
53 AQAP033 brown planthopper resistance
54 AQCU113 days to heading
55 AQCU174 spikelet fertility
56 AQCU224 leaf width
57 AQFW128 spikelet fertility
58 AQFV020 seedling vigor
59 AQFV021 seedling vigor
60 AQFV022 seedling vigor
61 AQFW035 leaf width
62 AQA014 tiller number
63 AQDR014 grain number
64 AQDR019 grain yield per panicle
65 AQDI005 hybrid incompatibilty
66 CQAR33 days to heading
67 CQAR34 plant height
68 CQAR35 spikelet number
69 CQB29 1000-grain weight
70 AQFA019 brown rice protein
71 AQBS019 plant height
72 AQBS026 panicle length
73 AQBS046 grain number
74 AQBS067 grain yield per panicle
75 AQGI081 root dry weight
76 AQGI261 total biomass yield
77 AQHR050 plant height
78 AQCV029 chalkiness of endosperm
79 CQAL15 grain width
80 CQE67 plant height

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000518 seedling development stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000559 long adventitious root (+)
2 MCP:1000560 short adventitious root (+)
3 PO:0005427 sclerenchyma (+)
4 PO:0005772 exodermis (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Shiono Katsuhiro; Yamauchi Takaki; Yamazaki So; Mohanty Bijayalaxmi; Malik Al Imran; Nagamura Yoshiaki; Nishizawa Naoko K; Tsutsumi Nobuhiro; Colmer Timothy D; Nakazono Mikio; Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa). Journal of experimental botany 2014:65
PMID [24913626]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India