Rice gene details
Searching for LOC_Os08g29110 [thioredoxin, putative, expressed ]


Functional details
Molecular Function
Not found
1 GO:0003824 catalytic activity (RGAP)
Biological process
Not found
1 GO:0016043 cellular component organization (RGAP)
2 GO:0009987 cellular process (RGAP)
3 GO:0008152 metabolic process (RGAP)
4 GO:0019725 cellular homeostasis (RGAP)
Cellular component
Not found
1 GO:0009579 thylakoid (RGAP)
2 GO:0005622 intracellular (RGAP)
3 GO:0009536 plastid (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007069 gibberellic acid regimen (-)
2 EO:0007196 light regimen (-)
3 EO:0007204 1-naphthaleneacetic acid (-)
4 EO:0007290 kinetin regimen (-)
5 MCE:1000203 dark regimen (-)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 CQN39 leaf senescence
2 AQBK019 days to heading
3 CQAP1 scent
4 CQN20 soluble protein content
5 CQN37 leaf senescence
6 CQN38 leaf senescence
7 CQAS102 spikelet number
8 CQAS103 seed number
9 CQAS104 yield
10 CQAS92 plant height
11 CQAS93 days to heading
12 CQAS94 days to maturity
13 CQAS97 spikelet number
14 CQAS98 spikelet density
15 CQAS99 seed number
16 AQCF042 filled grain number
17 AQCF043 spikelet number
18 AQDQ051 spikelet number
19 AQDQ052 plant height
20 AQDQ053 panicle length
21 AQDQ054 panicle length
22 CQAX35 plant height
23 CQAS96 panicle number
24 AQBK001 days to heading
25 CQAS100 seed set percent
26 CQAS101 1000-seed weight
27 CQAS95 panicle length
28 CQC6 days to heading
29 AQGD022 awn length
30 CQE65 plant height
31 CQE66 plant height
32 AQAL029 root thickness
33 AQFW094 leaf length
34 AQBJ026 primary branch
35 AQBJ029 primary branch
36 AQAP031 brown planthopper resistance
37 AQCU048 spikelet fertility
38 AQCU067 plant height
39 AQFW004 days to heading
40 AQFW040 days to heading
41 AQFW051 leaf width
42 AQFW056 days to heading
43 AQFW065 leaf width
44 AQFW080 days to heading
45 AQCE030 primary branch length
46 AQCE039 primary branch
47 AQFR029 seedling vigor
48 AQAP008 brown planthopper resistance
49 AQAP009 brown planthopper resistance
50 AQAP010 brown planthopper resistance
51 AQAP033 brown planthopper resistance
52 AQCU113 days to heading
53 AQCU174 spikelet fertility
54 AQCU224 leaf width
55 AQFW128 spikelet fertility
56 AQFV020 seedling vigor
57 AQFV021 seedling vigor
58 AQFV022 seedling vigor
59 AQFW035 leaf width
60 AQDI005 hybrid incompatibilty
61 CQAR33 days to heading
62 CQAR34 plant height
63 CQAR35 spikelet number
64 CQB29 1000-grain weight
65 AQFA019 brown rice protein
66 AQBS019 plant height
67 AQBS026 panicle length
68 AQBS046 grain number
69 AQBS067 grain yield per panicle
70 AQCV029 chalkiness of endosperm
71 CQAL15 grain width
72 CQE67 plant height
73 AQAI043 leaf area to spikelet number ratio
74 AQBC065 tiller angle
75 AQBC066 tiller angle
76 AQBC067 tiller angle
77 AQBC068 tiller angle
78 AQDP005 iron sensitivity
79 AQEA262 days to heading
80 AQEA263 days to heading
81 AQEA264 days to heading
82 AQEA265 days to heading
83 AQEA266 days to heading
84 AQEA267 days to heading
85 AQEA268 days to heading
86 AQEA269 days to heading
87 AQEA270 days to heading
88 AQEA271 days to heading
89 AQEA272 days to heading
90 CQK10 panicle number
91 CQL8 relative root length
92 CQL9 relative root length
93 AQFF044 spikelet sterility
94 CQAV6 osmotic adjustment capacity
95 CQAV7 osmotic adjustment capacity
96 CQAV9 osmotic adjustment capacity
97 CQAW25 tiller number
98 CQAW26 root number
99 AQDQ055 filled grain number

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000107 post-germination stage (-)
2 MCP:1000110 1 day pre-heading stage (-)
3 MCP:1000136 5 days pre-heading stage (-)
4 MCP:1000194 inflorescence 4-5cm stage (-)
5 MCP:1000201 14 days post-heading stage (-)
6 MCP:1000250 inflorescenece secondary branch primordium differentiation stage (-)
7 MCP:1000489 3 days post-anthesis stage (-)
8 MCP:1000518 seedling development stage (-)
9 PO:0007015 radicle emergence (-)
10 PO:0007022 imbibition (-)
11 PO:0007041 inflorescence emergence from flag leaf sheath (-)
12 PO:0007071 2.02 main shoot and axillary shoots visible at two nodes (-)
13 PO:0007106 LP.03 three leaves visible (-)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0000001 embryo proper (-)
2 PO:0005052 plant callus (-)
3 PO:0006000 Poaceae hull (-)
4 PO:0009005 root (-)
5 PO:0009006 shoot system (-)
6 PO:0009010 seed (-)
7 PO:0009025 vascular leaf (-)
8 PO:0009029 stamen (-)
9 PO:0009047 stem (-)
10 PO:0009049 inflorescence (-)
11 PO:0009051 spikelet (-)
12 PO:0020031 radicle (-)
13 PO:0020032 plumule (-)
14 PO:0020103 flag leaf (-)
15 PO:0020104 leaf sheath (-)
16 PO:0025034 leaf (-)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Nuruzzaman Mohammed; Gupta Madhur; Zhang Chengjun; Wang Lei; Xie Weibo; Xiong Lizhong; Zhang Qifa; Lian Xingming; Sequence and expression analysis of the thioredoxin protein gene family in rice. Molecular genetics and genomics 2008:280
PMID [18491141]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India