|
Searching for LOC_Os08g33370
[14-3-3 protein, putative, expressed ] |
|
|
Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os08g33370.1 |
257 |
3 |
240 |
PF00244.12 |
14/03/03 |
2 |
LOC_Os08g33370.2 |
257 |
3 |
240 |
PF00244.12 |
14/03/03 |
|
The basic information is from RGAP and Pfam/InterPro databases |
|
|
Gene model (download) 
IR64 N22
|
Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
|
N22InfloresenceFC |
|
N22 Root FC |
|
IR64 Flag-leaf FC |
|
IR64InfloresenceFC |
|
IR64 Root FC |
|
|
|
Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0005515 |
protein binding |
(RGAP) |
|
Biological process
Cellular component
|
Environment details
Metabolic Pathway details
QTL details
|
Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000338 |
15 days post-fertilization stage |
(+) |
2 |
MCP:1000518 |
seedling development stage |
(+) |
3 |
MCP:1000521 |
mature plant stage |
(+) |
4 |
PO:0007041 |
inflorescence emergence from flag leaf sheath |
(+) |
5 |
PO:0007617 |
5 post anthesis |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
|
Trait details
S. No. |
TO Id |
TO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCT:1000057 |
relative fresh weight |
(+) |
2 |
MCT:1000208 |
leaf whitening |
(+) |
3 |
TO:0000085 |
leaf rolling |
(+) |
4 |
TO:0002681 |
leaf curling |
(+) |
|
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
|
|
Related publications [Sorted by year] |
|
1 |
Ho Shin-Lon; Huang Li-Fen; Lu Chung-An; He Siou-Luan; Wang Chun-Chin; Yu Sheng-Ping; Chen Jychian; Yu Su-May; Sugar starvation- and GA-inducible calcium-dependent protein kinase 1 feedback regulates GA biosynthesis and activates a 14-3-3 protein to confer drought tolerance in rice seedlings. Plant molecular biology 2013:
PMID [23329372]
 |
|
|
2 |
Yao Yuan; Du Ying; Jiang Lin; Liu Jin-Yuan; Molecular analysis and expression patterns of the 14-3-3 gene family from Oryza sativa. Journal of Biochemistry and Molecular Biology 2007:40
PMID [17562286]
 |
|
|
|