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Searching for LOC_Os08g35740
[12-oxophytodienoate reductase, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os08g35740.1 |
395 |
15 |
365 |
PF00724.12 |
Oxidored_FMN |
2 |
LOC_Os08g35740.2 |
348 |
15 |
318 |
PF00724.12 |
Oxidored_FMN |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0016629 |
12-oxophytodienoate reductase activity |
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2 |
GO:0003824 |
catalytic activity |
(RGAP) |
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Biological process
Cellular component
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007198 |
water environment |
(+) |
2 |
EO:0007235 |
silicon nutrient regimen |
(+) |
3 |
EO:0007373 |
mechanical damage |
(+) |
4 |
MCE:1000069 |
dessication/dehydration stress |
(+) |
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Metabolic Pathway details
S. No. |
Pathway Id |
Pathway Description |
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1 |
PWY66-21 |
oxidative ethanol degradation I |
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QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
S. No. |
TO Id |
TO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
TO:0000437 |
male sterility |
(-) |
2 |
TO:0002668 |
jasmonic acid content |
(+) |
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Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Kim Yoon-Ha; Khan Abdul Latif; Waqas Muhammad; Jeong Hee-Jeong; Kim Duk-Hwan; Shin Jeong Sheop; Kim Jong-Guk; Yeon Myung-Hun; Lee In-Jung; Regulation of jasmonic acid biosynthesis by silicon application during physical injury to Oryza sativa L. Journal of plant research 2014:127
PMID [24840865]
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2 |
Yoshii Motoyasu; Yamazaki Muneo; Rakwal Randeep; Kishi-Kaboshi Mitsuko; Miyao Akio; Hirochika Hirohiko; The NAC transcription factor RIM1 of rice is a new regulator of jasmonate signaling. The Plant Journal 2010:61
PMID [20015061]
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3 |
Tani Tomoyuki; Sobajima Hiroyuki; Okada Kazunori; Chujo Tetsuya; Arimura Shin-Ichi; Tsutsumi Nobuhiro; Nishimura Mikio; Seto Hideharu; Nojiri Hideaki; Yamane Hisakazu; Identification of the OsOPR7 gene encoding 12-oxophytodienoate reductase involved in the biosynthesis of jasmonic acid in rice. Planta 2008:227
PMID [17938955]
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