Rice gene details Home Browse Search Contact Us Feedback Links Searching for LOC_Os08g36480 [nitrate reductase, putative, expressed ] Basic information [Pfam DB] Graphical representation of the protein domains S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name 1 LOC_Os08g36480.1 917 143 328 PF00174.11 Oxidored_molyb 2 LOC_Os08g36480.1 917 353 486 PF03404.8 Mo-co_dimer 3 LOC_Os08g36480.1 917 543 616 PF00173.20 Cyt-b5 4 LOC_Os08g36480.1 917 660 767 PF00970.16 FAD_binding_6 5 LOC_Os08g36480.1 917 787 899 PF00175.13 NAD_binding_1   The basic information is from RGAP and Pfam/InterPro databases Gene model (download) IR64 N22 Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change] N22 Flag-leaf FC   4 N22InfloresenceFC   8 N22 Root FC   -6 IR64 Flag-leaf FC   13 IR64InfloresenceFC   2 IR64 Root FC   -6 Functional details Molecular Function Not found 1 GO:0005515 protein binding (RGAP) 2 GO:0003824 catalytic activity (RGAP) Biological process Not found 1 GO:0008152 metabolic process (RGAP) 2 GO:0009628 response to abiotic stimulus (RGAP) 3 GO:0009058 biosynthetic process (RGAP) 4 GO:0009987 cellular process (RGAP) Cellular component Not found 1 GO:0005829 cytosol (RGAP) Environment details S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity 1 EO:0007171 pH regimen (+) 2 MCE:1000328 2-deoxymugineic acid (DMA) (+) 3 MCE:1000329 ethylenediaminetetraacetic acid (EDTA) (+) Metabolic Pathway details S. No. Pathway Id Pathway Description 1 PWY-381 nitrate reduction II (assimilatory) QTL details S. No. QTL Id QTL Associated Trait 1 AQBK019 days to heading 2 CQAP1 scent 3 CQN37 leaf senescence 4 CQN38 leaf senescence 5 CQAS102 spikelet number 6 CQAS103 seed number 7 CQAS104 yield 8 CQAS92 plant height 9 CQAS93 days to heading 10 CQAS94 days to maturity 11 CQAS97 spikelet number 12 CQAS98 spikelet density 13 CQAS99 seed number 14 AQDQ051 spikelet number 15 AQDQ052 plant height 16 AQDQ053 panicle length 17 AQDQ054 panicle length 18 CQAX35 plant height 19 CQAS96 panicle number 20 AQBK001 days to heading 21 CQAS100 seed set percent 22 CQAS101 1000-seed weight 23 CQAS95 panicle length 24 CQC6 days to heading 25 AQFV020 seedling vigor 26 AQFV021 seedling vigor 27 AQFV022 seedling vigor 28 AQFW035 leaf width 29 AQBS019 plant height 30 AQBS026 panicle length 31 AQBS046 grain number 32 AQBS067 grain yield per panicle 33 AQFF044 spikelet sterility 34 CQAV6 osmotic adjustment capacity 35 CQAV7 osmotic adjustment capacity 36 CQAV9 osmotic adjustment capacity 37 CQAW25 tiller number 38 CQAW26 root number 39 AQDQ055 filled grain number 40 AQGB056 chalkiness of endosperm 41 AQGB057 chalkiness of endosperm 42 AQGB058 chalkiness of endosperm 43 AQGB059 chalkiness of endosperm 44 AQGB060 chalkiness of endosperm 45 AQGB061 chalkiness of endosperm 46 AQGB062 chalkiness of endosperm 47 AQGB063 chalkiness of endosperm 48 AQGB076 chalkiness of endosperm 49 AQGB077 chalkiness of endosperm 50 AQGB078 chalkiness of endosperm 51 AQGB079 chalkiness of endosperm 52 AQGB080 chalkiness of endosperm 53 AQGB081 chalkiness of endosperm 54 AQGB082 chalkiness of endosperm 55 AQGB083 chalkiness of endosperm 56 AQGB088 chalkiness of endosperm 57 AQGB089 chalkiness of endosperm 58 AQGB090 chalkiness of endosperm 59 AQGB091 chalkiness of endosperm 60 AQGB092 chalkiness of endosperm 61 AQGB093 chalkiness of endosperm 62 AQGB094 chalkiness of endosperm 63 AQGB095 chalkiness of endosperm 64 CQF9 soluble protein content 65 CQF11 rubisco content 66 AQBZ014 plant height 67 CQR9 flour color 68 EQC0032 seed shattering 69 AQEE003 seed density 70 AQDX013 osmotic adjustment capacity 71 AQFF069 plant height 72 AQFF072 plant height 73 AQFF013 total biomass yield 74 AQFF043 spikelet sterility 75 AQGS036 grain yield 76 AQHR052 plant height 77 AQFE100 plant height 78 AQFF057 panicle number 79 AQFF063 panicle number 80 AQBP007 grain core percent white 81 AQAP016 brown planthopper resistance 82 AQAP018 brown planthopper resistance 83 AQAW015 primary branch 84 AQCU171 spikelet fertility 85 AQCU228 leaf width 86 AQFW124 spikelet fertility 87 AQFW134 days to heading 88 AQDY110 panicle length 89 AQDY111 panicle length 90 AQDY112 panicle length 91 AQDY113 panicle length 92 AQDY114 panicle length 93 AQDY115 panicle length Plant developmental stage / tissue details Plant development stage S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 MCP:1000518 seedling development stage (+) Plant tissue/organ S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 PO:0009005 root (+) 2 PO:0009006 shoot system (+) Others S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity Not found Trait details Not found Physical interaction details Interaction type: protein-protein Not found Interaction type: protein-DNA Not found Related publications [Sorted by year] 1  Araki Ryoichi; Kousaka Kayoko; Namba Kosuke; Murata Yoshiko; Murata Jun; 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81 PMID [25393516] Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India