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Searching for LOC_Os08g36480
[nitrate reductase, putative, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os08g36480.1 |
917 |
143 |
328 |
PF00174.11 |
Oxidored_molyb |
2 |
LOC_Os08g36480.1 |
917 |
353 |
486 |
PF03404.8 |
Mo-co_dimer |
3 |
LOC_Os08g36480.1 |
917 |
543 |
616 |
PF00173.20 |
Cyt-b5 |
4 |
LOC_Os08g36480.1 |
917 |
660 |
767 |
PF00970.16 |
FAD_binding_6 |
5 |
LOC_Os08g36480.1 |
917 |
787 |
899 |
PF00175.13 |
NAD_binding_1 |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Biological process
Cellular component
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007171 |
pH regimen |
(+) |
2 |
MCE:1000328 |
2-deoxymugineic acid (DMA) |
(+) |
3 |
MCE:1000329 |
ethylenediaminetetraacetic acid (EDTA) |
(+) |
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Metabolic Pathway details
S. No. |
Pathway Id |
Pathway Description |
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1 |
PWY-381 |
nitrate reduction II (assimilatory) |
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QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
Plant tissue/organ
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
PO:0009005 |
root |
(+) |
2 |
PO:0009006 |
shoot system |
(+) |
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Araki Ryoichi; Kousaka Kayoko; Namba Kosuke; Murata Yoshiko; Murata Jun; 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. The Plant journal : for cell and molecular biology 2015:81
PMID [25393516]
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