Rice gene details
Searching for LOC_Os08g43290 [LTPL44 - Protease inhibitor/seed storage/LTP family protein precursor, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os08g43290.1 95 34 92 PF00234.14 Tryp_alpha_amyl
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  -2
N22InfloresenceFC
  -27
N22 Root FC
  7
IR64 Flag-leaf FC
  -1
IR64InfloresenceFC
  3
IR64 Root FC
  15

Functional details
Molecular Function
Not found
1 GO:0008289 lipid binding (RGAP)
Biological process
Not found
1 GO:0006810 transport (RGAP)
Cellular component
Not found
1 GO:0005623 cell (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007404 drought environment (+)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 CQN37 leaf senescence
2 CQN38 leaf senescence
3 AQFW035 leaf width
4 AQBS019 plant height
5 AQBS026 panicle length
6 AQBS046 grain number
7 AQBS067 grain yield per panicle
8 AQDQ055 filled grain number
9 AQFF069 plant height
10 AQFF072 plant height
11 AQFF057 panicle number
12 AQFF063 panicle number
13 AQDY110 panicle length
14 AQDY111 panicle length
15 AQDY112 panicle length
16 AQDY113 panicle length
17 AQDY114 panicle length
18 AQDY115 panicle length
19 AQO065 root length
20 AQDD008 ash content
21 AQDD009 ash content
22 AQDQ056 grain yield per plant
23 AQDQ057 grain yield per plant
24 AQCN027 rice yellow mottle virus resistance
25 CQAX25 plant height
26 AQA010 tiller number
27 AQA038 root thickness
28 AQDZ010 culm thickness
29 CQE71 panicle number
30 CQF10 soluble protein content
31 AQCU033 leaf width
32 AQFR013 seedling vigor
33 AQFR039 seedling vigor
34 AQFR050 seedling vigor
35 AQFV023 seedling vigor
36 AQFV024 seedling vigor
37 AQFV025 seedling vigor
38 AQFV026 seedling vigor
39 AQFV027 seedling vigor
40 AQFV028 seedling vigor
41 AQCC004 stigma exsertion
42 AQEE001 filled grain percentage
43 CQE72 carbon content

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0007130 B reproductive growth (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0009046 flower (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Guo Changkui; Ge Xiaochun; Ma Hong; The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant molecular biology 2013:82
PMID [23686450]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India