Rice gene details
Searching for LOC_Os09g02270 [cyclase family protein, putative, expressed ]


Functional details
Molecular Function
S. No. GO Id GO Description
1 GO:0003674 molecular_function (RGAP)
Biological process
S. No. GO Id GO Description
1 GO:0008150 biological_process (RGAP)
Cellular component
S. No. GO Id GO Description
1 GO:0005886 plasma membrane  

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007048 sodium chloride regimen (-)
2 MCE:1000059 sodium carbonate regimen (Na2CO3) (-)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 AQEK010 iron sensitivity
2 AQGB064 chalkiness of endosperm
3 AQGB065 chalkiness of endosperm
4 AQGB066 chalkiness of endosperm
5 AQGB067 chalkiness of endosperm
6 AQGB068 chalkiness of endosperm
7 AQGB069 chalkiness of endosperm
8 AQGB070 chalkiness of endosperm
9 AQGB071 chalkiness of endosperm
10 AQGB085 chalkiness of endosperm
11 AQGB086 chalkiness of endosperm
12 AQGB087 chalkiness of endosperm
13 AQGB096 chalkiness of endosperm
14 AQGB097 chalkiness of endosperm
15 AQGB098 chalkiness of endosperm
16 AQGB099 chalkiness of endosperm
17 AQGB100 chalkiness of endosperm
18 AQGB101 chalkiness of endosperm
19 AQGB102 chalkiness of endosperm

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000251 pistil/stamen primordium differentiation stage (-)
2 MCP:1000518 seedling development stage (-)
3 MCP:1000520 young inflorescence stage (-)
4 PO:0007073 2 formation of axillary shoot (-)
5 PO:0007115 LP.04 four leaves visible (-)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0006012 leaf collar (-)
2 PO:0008037 seedling (-)
3 PO:0009005 root (-)
4 PO:0009006 shoot system (-)
5 PO:0009029 stamen (-)
6 PO:0009039 glume (-)
7 PO:0009047 stem (-)
8 PO:0009049 inflorescence (-)
9 PO:0009089 endosperm (-)
10 PO:0020103 flag leaf (-)
11 PO:0020104 leaf sheath (-)
12 PO:0025034 leaf (-)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
S. No. TO Id TO Description Presence(+) or absence(-) of gene expression /activity
1 TO:0000019 seedling height (-)
2 TO:0000227 root length (-)

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Qin Yonghua; Shen Xin; Wang Nili; Ding Xipeng; Characterization of a novel cyclase-like gene family involved in controlling stress tolerance in rice. Journal of plant physiology 2015:181
PMID [25974367]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India