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Searching for LOC_Os09g25490
[CESA9 - cellulose synthase, expressed ] |
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Basic information [Pfam DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
1 |
LOC_Os09g25490.1 |
1056 |
251 |
1050 |
PF03552.6 |
Cellulose_synt |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Not found |
1 |
GO:0016740 |
transferase activity |
(RGAP) |
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Biological process
Cellular component
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Environment details
Metabolic Pathway details
S. No. |
Pathway Id |
Pathway Description |
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1 |
PWY-1001 |
cellulose biosynthesis |
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QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
2 |
MCP:1000521 |
mature plant stage |
(-) |
3 |
PO:0007089 |
stem elongation |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
S. No. |
TO Id |
TO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCT:1000375 |
cellulose content |
(+) |
2 |
MCT:1000533 |
cell wall thickness |
(+) |
3 |
TO:0000207 |
plant height |
(+) |
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Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Yang Chunhua; Li Dayong; Liu Xue; Ji Chengjun; Hao Lili; Zhao Xianfeng; Li Xiaobing; Chen Caiyan; Cheng Zhukuan; Zhu Lihuang; OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14
PMID [24906444]
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2 |
Dai Xiaoxia; You Changjun; Chen Guoxing; Li Xianghua; Zhang Qifa; Wu Changyin; OsBC1L4 encodes a COBRA-like protein that affects cellulose synthesis in rice. Plant Molecular Biology 2011:75
PMID [21264494]
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3 |
Tanaka Katsuyuki; Murata Kazumasa; Yamazaki Muneo; Onosato Katsura; Miyao Akio; Hirochika Hirohiko; Three distinct rice cellulose synthase catalytic subunit genes required for cellulose synthesis in the secondary wall. Plant physiology 2003:133
PMID [12970476]
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