Rice gene details
Searching for LOC_Os09g38910 [OsWAK92 - OsWAK receptor-like protein kinase, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os09g38910.1 803 346 387 PF07645.7 EGF_CA
2 LOC_Os09g38910.1 803 475 677 PF00069.17 Pkinase
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  2
N22InfloresenceFC
  1
N22 Root FC
  -14
IR64 Flag-leaf FC
  3
IR64InfloresenceFC
  2
IR64 Root FC
  -2

Functional details
Molecular Function
S. No. GO Id GO Description
1 GO:0016301 kinase activity (RGAP)
2 GO:0005515 protein binding (RGAP)
Biological process
S. No. GO Id GO Description
1 GO:0009409 response to cold  
2 GO:0006950 response to stress (RGAP)
3 GO:0009607 response to biotic stimulus (RGAP)
4 GO:0008152 metabolic process (RGAP)
5 GO:0009987 cellular process (RGAP)
6 GO:0007165 signal transduction (RGAP)
7 GO:0008150 biological_process (RGAP)
Cellular component
S. No. GO Id GO Description
1 GO:0005773 vacuole (RGAP)
2 GO:0005618 cell wall (RGAP)
3 GO:0005886 plasma membrane (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007174 cold temperature regimen (+)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 CQE74 shoot elongation rate
2 AQF004 grain shattering
3 AQF040 seed dormancy
4 AQF071 anther length
5 AQF102 KClO3 resistance
6 CQF13 rubisco content
7 AQGS010 panicle length
8 AQGS028 seed weight
9 AQGS031 grain yield per plant
10 AQEE008 colored grain percentage
11 AQGP032 1000-seed weight
12 AQHF023 leaf senescence
13 AQHF042 leaf senescence
14 AQGM006 days to heading
15 AQGM024 spikelet fertility
16 AQGM036 grain yield

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000518 seedling development stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0009006 shoot system (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

de Oliveira Luiz Felipe Valter; Christoff Ana Paula; de Lima Júlio Cesar; de Ross Bruno Comparsi Feijó; Sachetto-Martins Gilberto; Margis-Pinheiro Marcia; Margis Rogerio; The Wall-associated Kinase gene family in rice genomes. Plant science : an international journal of experimental plant biology 2014:229
PMID [25443845]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India