Rice gene details
Searching for LOC_Os11g09010 [lipase, putative, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os11g09010.1 536 131 226 PF01764.17 Lipase_3
2 LOC_Os11g09010.2 657 131 226 PF01764.17 Lipase_3
3 LOC_Os11g09010.3 660 134 229 PF01764.17 Lipase_3
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  1
N22InfloresenceFC
  -3
N22 Root FC
  -1
IR64 Flag-leaf FC
  1
IR64InfloresenceFC
  16
IR64 Root FC
  -2

Functional details
Molecular Function
Not found
1 GO:0005515 protein binding (RGAP)
2 GO:0016787 hydrolase activity (RGAP)
Biological process
Not found
1 GO:0007275 multicellular organismal development (RGAP)
2 GO:0008152 metabolic process (RGAP)
3 GO:0009987 cellular process (RGAP)
4 GO:0009607 response to biotic stimulus (RGAP)
5 GO:0007165 signal transduction (RGAP)
6 GO:0006950 response to stress (RGAP)
7 GO:0009653 anatomical structure morphogenesis (RGAP)
8 GO:0006629 lipid metabolic process (RGAP)
Cellular component
Not found
1 GO:0005575 cellular_component (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 MCE:1000302 Xanthomonas oryzae pv. oryzicola strain RS105 (+)

Metabolic Pathway details
S. No. Pathway Id Pathway Description
1 LIPAS-PWY triacylglycerol degradation

QTL details
S. No. QTL Id QTL Associated Trait
1 CQN42 leaf senescence
2 CQN61 spikelet weight
3 AQBK033 spikelet number
4 AQE046 100-seed weight
5 AQE090 tiller number
6 CQAS141 spikelet number
7 AQFP025 culm thickness
8 AQT016 seed length
9 CQE78 specific leaf area
10 AQY004 plant height
11 AQCW017 H2O2 content
12 AQED005 days to heading
13 AQD020 leaf drying
14 AQHE040 root thickness
15 AQCG004 male fertility restoration
16 CQAN4 sheath blight disease resistance
17 CQAN8 sheath blight disease resistance

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0001053 3 leaf fully expanded (+)
2 PO:0007014 booting (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0025034 leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Guo Lijia; Guo Chiming; Li Min; Wang Wujing; Luo Chengke; Zhang Yuxia; Chen Liang; Suppression of expression of the putative receptor-like kinase gene NRRB enhances resistance to bacterial leaf streak in rice. Molecular biology reports 2014:
PMID [24420860]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India