Rice gene details
Searching for LOC_Os11g10990 [heat shock protein DnaJ, putative, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os11g10990.1 252 109 172 PF00226.23 DnaJ
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
N22 Root FC
IR64 Flag-leaf FC
IR64 Root FC

Functional details
Molecular Function
S. No. GO Id GO Description
1 GO:0005515 protein binding (RGAP)
Biological process
S. No. GO Id GO Description
1 GO:0006979 response to oxidative stress  
2 GO:0009408 response to heat  
3 GO:0009409 response to cold  
4 GO:0009414 response to water deprivation  
5 GO:0009416 response to light stimulus  
6 GO:0009644 response to high light intensity  
7 GO:0009737 response to abscisic acid stimulus  
8 GO:0034059 response to anoxia  
9 GO:0019538 protein metabolic process (RGAP)
10 GO:0009987 cellular process (RGAP)
Cellular component
S. No. GO Id GO Description
1 GO:0009536 plastid (RGAP)

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007025 anaerobic environment (+)
2 EO:0007048 sodium chloride regimen (+)
3 EO:0007075 high light intensity regimen (+)
4 EO:0007105 abscisic acid regimen (+)
5 EO:0007173 warm/hot temperature regimen (+)
6 EO:0007174 cold temperature regimen (+)
7 EO:0007332 cold air temperature regimen (+)
8 EO:0007404 drought environment (+)
9 MCE:1000091 methyl viologen/paraquat (+)

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 CQN42 leaf senescence
2 CQN61 spikelet weight
3 AQE046 100-seed weight
4 AQE090 tiller number
5 CQAS141 spikelet number
6 AQFP025 culm thickness
7 AQT016 seed length
8 CQE78 specific leaf area
9 AQY004 plant height
10 AQED005 days to heading
11 AQD020 leaf drying
12 AQHE040 root thickness
13 AQCG004 male fertility restoration
14 CQAN4 sheath blight disease resistance
15 CQAN8 sheath blight disease resistance
16 AQAL037 biomass yield

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000518 seedling development stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0008037 seedling (+)
2 PO:0009025 vascular leaf (+)
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Sarkar Neelam K; Thapar Upasna; Kundnani Preeti; Panwar Priyankar; Grover Anil; Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18
PMID [23160806]

Park Hee-Yeon; Kang In Soon; Han Ji-Sung; Lee Choon-Hwan; An Gynheung; Moon Yong-Hwan; OsDEG10 encoding a small RNA-binding protein is involved in abiotic stress signaling. Biochemical and Biophysical Research Communications 2009:380
PMID [19285007]

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India