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Searching for LOC_Os11g43950
[dnaJ domain containing protein, expressed ] |
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Basic information [Interpro DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Interpro ID |
Domain Name |
1 |
LOC_Os11g43950.1 |
889 |
19 |
36 |
|
seg |
2 |
LOC_Os11g43950.1 |
889 |
56 |
69 |
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seg |
3 |
LOC_Os11g43950.1 |
889 |
80 |
89 |
|
seg |
4 |
LOC_Os11g43950.1 |
889 |
108 |
118 |
|
seg |
5 |
LOC_Os11g43950.1 |
889 |
258 |
269 |
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seg |
6 |
LOC_Os11g43950.1 |
889 |
415 |
430 |
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seg |
7 |
LOC_Os11g43950.1 |
889 |
497 |
553 |
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coiled-coil |
8 |
LOC_Os11g43950.1 |
889 |
505 |
540 |
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seg |
9 |
LOC_Os11g43950.1 |
889 |
543 |
663 |
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seg |
10 |
LOC_Os11g43950.1 |
889 |
597 |
648 |
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coiled-coil |
11 |
LOC_Os11g43950.1 |
889 |
717 |
888 |
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AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED |
12 |
LOC_Os11g43950.1 |
889 |
742 |
764 |
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seg |
13 |
LOC_Os11g43950.1 |
889 |
755 |
788 |
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coiled-coil |
14 |
LOC_Os11g43950.1 |
889 |
788 |
885 |
IPR001623 |
no description |
15 |
LOC_Os11g43950.1 |
889 |
791 |
886 |
IPR001623 |
Chaperone J-domain |
16 |
LOC_Os11g43950.1 |
889 |
823 |
889 |
IPR001623 |
DnaJ |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Biological process
Cellular component
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007048 |
sodium chloride regimen |
(+) |
2 |
EO:0007105 |
abscisic acid regimen |
(+) |
3 |
EO:0007173 |
warm/hot temperature regimen |
(+) |
4 |
EO:0007174 |
cold temperature regimen |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000518 |
seedling development stage |
(+) |
Plant tissue/organ
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
PO:0008037 |
seedling |
(+) |
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Sarkar Neelam K; Thapar Upasna; Kundnani Preeti; Panwar Priyankar; Grover Anil; Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18
PMID [23160806]
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