Rice gene details
Searching for LOC_Os12g32750 [flavin monooxygenase, putative, expressed ]

Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os12g32750.1 449 47 77 PF01494.11 FAD_binding_3
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22

Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  2
N22InfloresenceFC
  2
N22 Root FC
  1
IR64 Flag-leaf FC
 
IR64InfloresenceFC
  -1
IR64 Root FC
  -1

Functional details
Molecular Function
Not found
1 GO:0000166 nucleotide binding (RGAP)
2 GO:0005488 binding (RGAP)
3 GO:0003824 catalytic activity (RGAP)
Biological process
Not found
1 GO:0008152 metabolic process (RGAP)
Cellular component
Not found

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 MCE:1000103 fluridone (+)

Metabolic Pathway details
S. No. Pathway Id Pathway Description
1 PWY-581 IAA biosynthesis I

QTL details
Not found

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0007098 LP.02 two leaves visible (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0000003 whole plant (+)
2 PO:0025034 leaf (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Du Hao; Wu Nai; Chang Yu; Li Xianghua; Xiao Jinghua; Xiong Lizhong; Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83
PMID [23846670]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India