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Searching for LOC_Os12g44380
[sucrose transporter, putativ, expressed ] |
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Basic information [Interpro DB] |
Graphical representation of the protein domains |
S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Interpro ID |
Domain Name |
1 |
LOC_Os12g44380.1 |
502 |
1 |
492 |
IPR016196 |
MFS general substrate transporter |
2 |
LOC_Os12g44380.1 |
502 |
7 |
18 |
|
seg |
3 |
LOC_Os12g44380.1 |
502 |
20 |
488 |
|
SUGAR TRANSPORTER |
4 |
LOC_Os12g44380.1 |
502 |
20 |
488 |
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SUCROSE TRANSPORT |
5 |
LOC_Os12g44380.1 |
502 |
22 |
494 |
IPR005989 |
GPH_sucrose: sucrose/H+ symporter |
6 |
LOC_Os12g44380.1 |
502 |
101 |
111 |
|
seg |
7 |
LOC_Os12g44380.1 |
502 |
226 |
240 |
|
seg |
8 |
LOC_Os12g44380.1 |
502 |
462 |
481 |
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seg |
9 |
LOC_Os12g44380.2 |
459 |
7 |
18 |
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seg |
10 |
LOC_Os12g44380.2 |
459 |
20 |
435 |
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SUGAR TRANSPORTER |
11 |
LOC_Os12g44380.2 |
459 |
20 |
435 |
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SUCROSE TRANSPORT |
12 |
LOC_Os12g44380.2 |
459 |
22 |
459 |
IPR005989 |
GPH_sucrose: sucrose/H+ symporter |
13 |
LOC_Os12g44380.2 |
459 |
25 |
436 |
IPR016196 |
MFS general substrate transporter |
14 |
LOC_Os12g44380.2 |
459 |
101 |
111 |
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seg |
15 |
LOC_Os12g44380.2 |
459 |
226 |
240 |
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seg |
16 |
LOC_Os12g44380.3 |
355 |
22 |
341 |
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SUGAR TRANSPORTER |
17 |
LOC_Os12g44380.3 |
355 |
22 |
341 |
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SUCROSE TRANSPORT |
18 |
LOC_Os12g44380.3 |
355 |
24 |
345 |
IPR016196 |
MFS general substrate transporter |
19 |
LOC_Os12g44380.3 |
355 |
79 |
93 |
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seg |
20 |
LOC_Os12g44380.3 |
355 |
315 |
334 |
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seg |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC |
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N22InfloresenceFC |
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N22 Root FC |
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IR64 Flag-leaf FC |
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IR64InfloresenceFC |
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IR64 Root FC |
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Functional details
Molecular Function
Not found |
1 |
GO:0005215 |
transporter activity |
(RGAP) |
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Biological process
Cellular component
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007174 |
cold temperature regimen |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
Plant tissue/organ
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
PO:0000003 |
whole plant |
(+) |
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
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Related publications [Sorted by year] |
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1 |
Xu Peipei; Cai Weiming; RAN1 is involved in plant cold resistance and development in rice (Oryza sativa). Journal of experimental botany 2014:65
PMID [24790113]
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