Update Details
Update (Version.1) statistics
  PubMed Ids Curated 50
   
  Number of Proteins 206 (144 New)
   
  Plant Ontology Terms 158 (33 New)
   
  Environmental Ontology Terms 92 (24 New)
     
  Trait Ontology Terms 178 (60 New)
     
  Gene Ontology Terms 89 (21 New)

S.No Gene Id          Gene Description  PubMed Ids
1  AAB18814   metallothionein-like protein
24381099
[Wu Chung-Shen et al. The promoter and the 5'-untranslated region of rice metallothionein OsMT2b gene are capable of directing high-level gene expression in germinated rice embryos. Plant cell reports 2014:]
2  AAB30197   beta-glucuronidase
22368778
[Ishimaru Yasuhiro et al. Characterizing the role of rice NRAMP5 in Manganese, Iron and Cadmium Transport. Scientific reports 2012:2]
24381099
[Wu Chung-Shen et al. The promoter and the 5'-untranslated region of rice metallothionein OsMT2b gene are capable of directing high-level gene expression in germinated rice embryos. Plant cell reports 2014:]
24391861
[Yang Meng et al. OsNRAMP3 Is a Vascular Bundles-Specific Manganese Transporter That Is Responsible for Manganese Distribution in Rice. PloS one 2013:8]
24410953
[Kaur Charanpreet et al. Expression of abiotic stress inducible ETHE1-like protein from rice is higher in roots and is regulated by calcium. Physiologia plantarum 2014:]
24459431
[Rerksiri Wirat et al. Expression and promoter analysis of six heat stress-inducible genes in rice. The Scientific World Journal 2013:2013]
24474809
[Kim Hyunmi et al. Overexpression of PYL5 in rice enhances drought tolerance, inhibits growth, and modulates gene expression. Journal of experimental botany 2014:65]
24475234
[Shan Chi et al. OsGA2ox5, a Gibberellin Metabolism Enzyme, Is Involved in Plant Growth, the Root Gravity Response and Salt Stress. PloS one 2014:9]
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
24654769
[Hanaoka Hideki et al. OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions. The Plant journal : for cell and molecular biology 2014:]
3  AAB36424   OsNramp1
8616217
[Belouchi A et al. The macrophage-specific membrane protein Nramp controlling natural resistance to infections in mice has homologues expressed in the root system of plants. Plant molecular biology 1995:29]
4  AAB48239   gibberellin C-20 oxidase
24475234
[Shan Chi et al. OsGA2ox5, a Gibberellin Metabolism Enzyme, Is Involved in Plant Growth, the Root Gravity Response and Salt Stress. PloS one 2014:9]
5  AAB49685   pathogenesis-related protein class 1
11097833
[Agrawal G K et al. Rice (Oryza sativa L.) OsPR1b gene is phytohormonally regulated in close interaction with light signals. Biochemical and biophysical research communications 2000:278]
11527396
[Jwa N S et al. Molecular cloning and characterization of a novel Jasmonate inducible pathogenesis-related class 10 protein gene, JIOsPR10, from rice (Oryza sativa L.) seedling leaves. Biochemical and biophysical research communications 2001:286]
19466605
[Koo Sung Cheol et al. The calmodulin-binding transcription factor OsCBT suppresses defense responses to pathogens in rice. Molecules and cells 2009:27]
6  AAB53367   pathogenesis-related thaumatin-like protein
24420860
[Guo Lijia et al. Suppression of expression of the putative receptor-like kinase gene NRRB enhances resistance to bacterial leaf streak in rice. Molecular biology reports 2014:]
7  AAB61961   integral membrane protein
9154989
[Belouchi A et al. Cloning and characterization of the OsNramp family from Oryza sativa, a new family of membrane proteins possibly implicated in the transport of metal ions. Plant molecular biology 1997:33]
8  AAB62273   integral membrane protein
9154989
[Belouchi A et al. Cloning and characterization of the OsNramp family from Oryza sativa, a new family of membrane proteins possibly implicated in the transport of metal ions. Plant molecular biology 1997:33]
9  AAC49720   integral membrane protein OsNramp3
9154989
[Belouchi A et al. Cloning and characterization of the OsNramp family from Oryza sativa, a new family of membrane proteins possibly implicated in the transport of metal ions. Plant molecular biology 1997:33]
10  AAF85972   AF274850_1 pathogenesis-related protein PR-10a
19466605
[Koo Sung Cheol et al. The calmodulin-binding transcription factor OsCBT suppresses defense responses to pathogens in rice. Molecules and cells 2009:27]
11  AAF85973   AF274851_1 pathogenesis-related protein PR-10b
19466605
[Koo Sung Cheol et al. The calmodulin-binding transcription factor OsCBT suppresses defense responses to pathogens in rice. Molecules and cells 2009:27]
12  AAL05613   AF289478_1 ammonium transporter 1-2
23509111
[Funayama Kazuhiro et al. Cytosolic glutamine synthetase1;2 is responsible for the primary assimilation of ammonium in rice roots. Plant & cell physiology 2013:]
13  AAL05614   AF289479_1 ammonium transporter 1-3
23509111
[Funayama Kazuhiro et al. Cytosolic glutamine synthetase1;2 is responsible for the primary assimilation of ammonium in rice roots. Plant & cell physiology 2013:]
14  AAX18700   NPR1-like 1
24420860
[Guo Lijia et al. Suppression of expression of the putative receptor-like kinase gene NRRB enhances resistance to bacterial leaf streak in rice. Molecular biology reports 2014:]
15  ABQ42205   dehydration-responsive element binding protein 6 [Glycine max]
24376625
[Zhang Xiu-Xiang et al. OsDREB2A, a Rice Transcription Factor, Significantly Affects Salt Tolerance in Transgenic Soybean. PloS one 2013:8]
16  ACA14488   GHD7
24420930
[Choi Sang Chul et al. Trithorax Group Protein Oryza sativa Trithorax1 Controls Flowering Time in Rice via Interaction with Early heading date3. Plant physiology 2014:164]
17  ACD47129   EREBP/AP2 transcription factor [Glycine max]
24376625
[Zhang Xiu-Xiang et al. OsDREB2A, a Rice Transcription Factor, Significantly Affects Salt Tolerance in Transgenic Soybean. PloS one 2013:8]
18  AEQ55266   ethylene-responsive transcription factor 7 [Glycine max]
24376625
[Zhang Xiu-Xiang et al. OsDREB2A, a Rice Transcription Factor, Significantly Affects Salt Tolerance in Transgenic Soybean. PloS one 2013:8]
19  AFB77198   dehydration responsive element binding protein 2a (DREB2A) mRNA, complete cds
24376625
[Zhang Xiu-Xiang et al. OsDREB2A, a Rice Transcription Factor, Significantly Affects Salt Tolerance in Transgenic Soybean. PloS one 2013:8]
20  AK070533   cDNA clone:J023060B22
24441161
[Bao Zhihua et al. A Rice Gene for Microbial Symbiosis, Oryza sativa CCaMK, Reduces CH4 Flux in a Paddy Field with Low Nitrogen Input. Applied and environmental microbiology 2014:80]
21  AK100267   cDNA clone:J023065A19
24482191
[Yamada Nana et al. Expression and functional analysis of putative vacuolar Ca(2+)-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars. Protoplasma 2014:]
22  AK120689   cDNA clone:J013169E21
24420860
[Guo Lijia et al. Suppression of expression of the putative receptor-like kinase gene NRRB enhances resistance to bacterial leaf streak in rice. Molecular biology reports 2014:]
23  AT1G30400   ABCC1,ATP-binding cassette C1
23700971
[Tiwari Manish et al. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant, cell & environment 2014:37]
24  AT1G53580   GLY3,glyoxalase II 3
24410953
[Kaur Charanpreet et al. Expression of abiotic stress inducible ETHE1-like protein from rice is higher in roots and is regulated by calcium. Physiologia plantarum 2014:]
25  AT2G19110   HMA4,heavy metal atpase 4
23700971
[Tiwari Manish et al. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant, cell & environment 2014:37]
26  AT2G34660   ABCC2,ATP-binding cassette C2
23700971
[Tiwari Manish et al. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant, cell & environment 2014:37]
27  AT2G43560   FKBP-like peptidyl-prolyl cis-trans isomerase family protein
23485991
[ Park Hyun Ji et al. A Rice Immunophilin Gene, OsFKBP16-3, Confers Tolerance to Environmental Stress in Arabidopsis and Rice. International journal of molecular sciences 2013:14]
28  AT4G10380   NIP5;1,NOD26-like intrinsic protein 5;1
24654769
[Hanaoka Hideki et al. OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions. The Plant journal : for cell and molecular biology 2014:]
29  BAA78385   heat shock protein 26
21984008
[Kim Kyung-Hee et al. Overexpression of a chloroplast-localized small heat shock protein OsHSP26 confers enhanced tolerance against oxidative and heat stresses in tall fescue. Biotechnology letters 2012:34]
30  BAA81886   MADS box-like protein
24420930
[Choi Sang Chul et al. Trithorax Group Protein Oryza sativa Trithorax1 Controls Flowering Time in Rice via Interaction with Early heading date3. Plant physiology 2014:164]
31  BAB70509   DNAJ homologue
15806324
[Yamamoto Taichi et al. Interaction between proliferating cell nuclear antigen (PCNA) and a DnaJ induced by DNA damage. Journal of plant research 2005:118]
32  BAB97267   chloride channel
23918260
[Liu Citao et al. OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice. Plant molecular biology 2014:84]
33  BAC77078   B-type response regulator
24420930
[Choi Sang Chul et al. Trithorax Group Protein Oryza sativa Trithorax1 Controls Flowering Time in Rice via Interaction with Early heading date3. Plant physiology 2014:164]
34  BAC81428   GID2
24475234
[Shan Chi et al. OsGA2ox5, a Gibberellin Metabolism Enzyme, Is Involved in Plant Growth, the Root Gravity Response and Salt Stress. PloS one 2014:9]
35  BAG95677   unnamed protein product
23290459
[Liu Yonghai et al. Tiller number is altered in the ascorbic acid-deficient rice suppressed for l-galactono-1,4-lactone dehydrogenase. Journal of plant physiology 2013:]
36  BAJ25745   heavy metal transporter 3
24405887
[Kim Yoon-Ha et al. Silicon mitigates heavy metal stress by regulating P-type heavy metal ATPases, Oryza sativa low silicon genes, and endogenous phytohormones. BMC plant biology 2014:14]
37  BAM36049   heavy metal ATPase 2
24405887
[Kim Yoon-Ha et al. Silicon mitigates heavy metal stress by regulating P-type heavy metal ATPases, Oryza sativa low silicon genes, and endogenous phytohormones. BMC plant biology 2014:14]
38  BAO56893   Low affinity cation transporter
24627964
[Uraguchi Shimpei et al. Characterization of OsLCT1, a cadmium transporter from indica rice (Oryza sativa). Physiologia plantarum 2014:]
39  CAA09852   cyclin D2.1 [Nicotiana tabacum]
23233223
[Naren et al. Overexpression of OsDPR, a novel rice gene highly expressed under iron deficiency, suppresses plant growth. Science China. Life sciences 2012:55]
40  CAA57157   calcium-dependent protein kinase
11206974
[Morello L et al. Overexpression of the calcium-dependent protein kinase OsCDPK2 in transgenic rice is repressed by light in leaves and disrupts seed development. Transgenic research 2000:9]
41  CAA61955   naringenin-chalcone synthase
24420860
[Guo Lijia et al. Suppression of expression of the putative receptor-like kinase gene NRRB enhances resistance to bacterial leaf streak in rice. Molecular biology reports 2014:]
42  CAA69252   anthocyanidin synthase
24389954
[Chen Xiaoqiong et al. Physiological factors affecting transcription of genes involved in the flavonoid biosynthetic pathway in different rice varieties. Plant signaling & behavior 2014:8]
43  CAA69253   Dihydroflavonol reductase
24389954
[Chen Xiaoqiong et al. Physiological factors affecting transcription of genes involved in the flavonoid biosynthetic pathway in different rice varieties. Plant signaling & behavior 2014:8]
44  CAC03571   PR1a protein
10903912
[Agrawal G K et al. A novel rice (Oryza sativa L.) acidic PR1 gene highly responsive to cut, phytohormones, and protein phosphatase inhibitors. Biochemical and biophysical research communications 2000:274]
11097833
[Agrawal G K et al. Rice (Oryza sativa L.) OsPR1b gene is phytohormonally regulated in close interaction with light signals. Biochemical and biophysical research communications 2000:278]
19466605
[Koo Sung Cheol et al. The calmodulin-binding transcription factor OsCBT suppresses defense responses to pathogens in rice. Molecules and cells 2009:27]
24420860
[Guo Lijia et al. Suppression of expression of the putative receptor-like kinase gene NRRB enhances resistance to bacterial leaf streak in rice. Molecular biology reports 2014:]
45  LOC_Os01g05490   triosephosphate isomerase, cytosolic, putative, expressed
24412201
[Wang Zhan Qi et al. Root proteome of rice studied by iTRAQ provides integrated insight into aluminum stress tolerance mechanisms in plants. Journal of proteomics 2014:98]
46  LOC_Os01g07120   AP2 domain containing protein, expressed
22078375
[Cui Meng et al. Induced over-expression of the transcription factor OsDREB2A improves drought tolerance in rice. Plant physiology and biochemistry 2011:49]
47  LOC_Os01g08220   gibberellin 3-beta-dioxygenase 2-2, putative, expressed
23329372
[Ho Shin-Lon et al. Sugar starvation- and GA-inducible calcium-dependent protein kinase 1 feedback regulates GA biosynthesis and activates a 14-3-3 protein to confer drought tolerance in rice seedlings. Plant molecular biology 2013:]
48  LOC_Os01g25320   auxilin, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
49  LOC_Os01g36294   cytochrome P450, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
50  LOC_Os01g37560   chaperone protein dnaJ 49, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
51  LOC_Os01g37690   sodium/calcium exchanger protein, putative, expressed
24482191
[Yamada Nana et al. Expression and functional analysis of putative vacuolar Ca(2+)-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars. Protoplasma 2014:]
52  LOC_Os01g37760   glutamate dehydrogenase protein, putative, expressed
24420570
[Ranathunge Kosala et al. AMT1;1 transgenic rice plants with enhanced NH4 + permeability show superior growth and higher yield under optimal and suboptimal NH4 + conditions. Journal of experimental botany 2014:65]
53  LOC_Os01g37910   vacuolar-processing enzyme precursor, putative, expressed
24388520
[Christoff Ana Paula et al. Uncovering legumain genes in rice. Plant science : an international journal of experimental plant biology 2014:215-216]
54  LOC_Os01g37910.1m   vacuolar-processing enzyme precursor, putative, expressed
24388520
[Christoff Ana Paula et al. Uncovering legumain genes in rice. Plant science : an international journal of experimental plant biology 2014:215-216]
55  LOC_Os01g37910.2m   vacuolar-processing enzyme precursor, putative, expressed
24388520
[Christoff Ana Paula et al. Uncovering legumain genes in rice. Plant science : an international journal of experimental plant biology 2014:215-216]
56  LOC_Os01g47690   metallo-beta-lactamase family protein, putative, expressed
24410953
[Kaur Charanpreet et al. Expression of abiotic stress inducible ETHE1-like protein from rice is higher in roots and is regulated by calcium. Physiologia plantarum 2014:]
57  LOC_Os01g48960   glutamate synthase, chloroplast precursor, putative, expressed
23509111
[Funayama Kazuhiro et al. Cytosolic glutamine synthetase1;2 is responsible for the primary assimilation of ammonium in rice roots. Plant & cell physiology 2013:]
58  LOC_Os01g50110   MYB family transcription factor, putative, expressed
23918260
[Liu Citao et al. OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice. Plant molecular biology 2014:84]
59  LOC_Os01g50700   dehydrin family protein, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
60  LOC_Os01g53020   heat shock protein DnaJ, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
61  LOC_Os01g54600   OsWRKY13 - Superfamily of TFs having WRKY and zinc finger domains, expressed
24420860
[Guo Lijia et al. Suppression of expression of the putative receptor-like kinase gene NRRB enhances resistance to bacterial leaf streak in rice. Molecular biology reports 2014:]
62  LOC_Os01g59120   cyclin, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
63  LOC_Os01g60190   2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed
24412201
[Wang Zhan Qi et al. Root proteome of rice studied by iTRAQ provides integrated insight into aluminum stress tolerance mechanisms in plants. Journal of proteomics 2014:98]
64  LOC_Os01g62760   protein phosphatase 2C, putative, expressed
23918260
[Liu Citao et al. OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice. Plant molecular biology 2014:84]
65  LOC_Os01g66100   gibberellin 20 oxidase 2, putative, expressed
23329372
[Ho Shin-Lon et al. Sugar starvation- and GA-inducible calcium-dependent protein kinase 1 feedback regulates GA biosynthesis and activates a 14-3-3 protein to confer drought tolerance in rice seedlings. Plant molecular biology 2013:]
66  LOC_Os01g67810   transposon protein, putative, unclassified, expressed
23400832
[Lin Chung-Yi et al. Comparison of early transcriptome responses to copper and cadmium in rice roots. Plant molecular biology 2013:]
67  LOC_Os01g67820   exo70 exocyst complex subunit domain containing protein, expressed
23400832
[Lin Chung-Yi et al. Comparison of early transcriptome responses to copper and cadmium in rice roots. Plant molecular biology 2013:]
68  LOC_Os01g71240   calcium-transporting ATPase, plasma membrane-type, putative, expressed
24482191
[Yamada Nana et al. Expression and functional analysis of putative vacuolar Ca(2+)-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars. Protoplasma 2014:]
69  LOC_Os01g73020   mitochondrial import inner membrane translocase subunit Tim16, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
70  LOC_Os02g02400   catalase isozyme A, putative, expressed
23918260
[Liu Citao et al. OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice. Plant molecular biology 2014:84]
71  LOC_Os02g04630   sodium/calcium exchanger protein, putative, expressed
24482191
[Yamada Nana et al. Expression and functional analysis of putative vacuolar Ca(2+)-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars. Protoplasma 2014:]
72  LOC_Os02g06380   plant-specific domain TIGR01627 family protein, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
73  LOC_Os02g07830   OsHKT1;3 - Na+ transporter, expressed
23918260
[Liu Citao et al. OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice. Plant molecular biology 2014:84]
74  LOC_Os02g12790   GATA zinc finger domain containing protein, expressed
23548780
[Hudson Darryl et al. Rice Cytokinin GATA Transcription Factor 1 Regulates Chloroplast Development and Plant Architecture. Plant physiology 2013:]
75  LOC_Os02g21009   sodium/calcium exchanger protein, putative, expressed
24482191
[Yamada Nana et al. Expression and functional analysis of putative vacuolar Ca(2+)-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars. Protoplasma 2014:]
76  LOC_Os02g30620   dnaJ domain containing protein, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
77  LOC_Os02g35000   chaperone protein dnaJ 10, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
78  LOC_Os02g36974   14-3-3 protein, putative, expressed
23329372
[Ho Shin-Lon et al. Sugar starvation- and GA-inducible calcium-dependent protein kinase 1 feedback regulates GA biosynthesis and activates a 14-3-3 protein to confer drought tolerance in rice seedlings. Plant molecular biology 2013:]
79  LOC_Os02g38920   glyceraldehyde-3-phosphate dehydrogenase, putative, expressed
24412201
[Wang Zhan Qi et al. Root proteome of rice studied by iTRAQ provides integrated insight into aluminum stress tolerance mechanisms in plants. Journal of proteomics 2014:98]
80  LOC_Os02g41954   gibberellin 2-beta-dioxygenase 7, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
81  LOC_Os02g43010   vacuolar-processing enzyme precursor, putative, expressed
24388520
[Christoff Ana Paula et al. Uncovering legumain genes in rice. Plant science : an international journal of experimental plant biology 2014:215-216]
82  LOC_Os02g43010.1m   vacuolar-processing enzyme precursor, putative, expressed
24388520
[Christoff Ana Paula et al. Uncovering legumain genes in rice. Plant science : an international journal of experimental plant biology 2014:215-216]
83  LOC_Os02g43010.2m   vacuolar-processing enzyme precursor, putative, expressed
24388520
[Christoff Ana Paula et al. Uncovering legumain genes in rice. Plant science : an international journal of experimental plant biology 2014:215-216]
84  LOC_Os02g50240   glutamine synthetase, catalytic domain containing protein, expressed
23509111
[Funayama Kazuhiro et al. Cytosolic glutamine synthetase1;2 is responsible for the primary assimilation of ammonium in rice roots. Plant & cell physiology 2013:]
24420570
[Ranathunge Kosala et al. AMT1;1 transgenic rice plants with enhanced NH4 + permeability show superior growth and higher yield under optimal and suboptimal NH4 + conditions. Journal of experimental botany 2014:65]
85  LOC_Os02g51110   aquaporin protein, putative, expressed
24405887
[Kim Yoon-Ha et al. Silicon mitigates heavy metal stress by regulating P-type heavy metal ATPases, Oryza sativa low silicon genes, and endogenous phytohormones. BMC plant biology 2014:14]
86  LOC_Os02g56130   PCNA - Putative DNA replicative polymerase clamp, expressed
15806324
[Yamamoto Taichi et al. Interaction between proliferating cell nuclear antigen (PCNA) and a DnaJ induced by DNA damage. Journal of plant research 2005:118]
87  LOC_Os02g56380   OsWAK21 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed
22551450
[ Redillas Mark C F R et al. The overexpression of OsNAC9 alters the root architecture of rice plants enhancing drought resistance and grain yield under field conditions. Plant biotechnology journal 2012:10]
88  LOC_Os02g56700   dehydrogenase, putative, expressed
22551450
[ Redillas Mark C F R et al. The overexpression of OsNAC9 alters the root architecture of rice plants enhancing drought resistance and grain yield under field conditions. Plant biotechnology journal 2012:10]
23094910
[ Jeong Jin Seo et al. OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012: ]
89  LOC_Os02g58220   RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
90  LOC_Os03g01700   expressed protein
24405887
[Kim Yoon-Ha et al. Silicon mitigates heavy metal stress by regulating P-type heavy metal ATPases, Oryza sativa low silicon genes, and endogenous phytohormones. BMC plant biology 2014:14]
91  LOC_Os03g03370   fatty acid hydroxylase, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
92  LOC_Os03g03660   CAMK_CAMK_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
23329372
[Ho Shin-Lon et al. Sugar starvation- and GA-inducible calcium-dependent protein kinase 1 feedback regulates GA biosynthesis and activates a 14-3-3 protein to confer drought tolerance in rice seedlings. Plant molecular biology 2013:]
93  LOC_Os03g04680   cytochrome P450, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
94  LOC_Os03g12290   glutamine synthetase, catalytic domain containing protein, expressed
23509111
[Funayama Kazuhiro et al. Cytosolic glutamine synthetase1;2 is responsible for the primary assimilation of ammonium in rice roots. Plant & cell physiology 2013:]
24420570
[Ranathunge Kosala et al. AMT1;1 transgenic rice plants with enhanced NH4 + permeability show superior growth and higher yield under optimal and suboptimal NH4 + conditions. Journal of experimental botany 2014:65]
95  LOC_Os03g15033   expressed protein
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
96  LOC_Os03g15360   nmrA-like family domain containing protein
24389954
[Chen Xiaoqiong et al. Physiological factors affecting transcription of genes involved in the flavonoid biosynthetic pathway in different rice varieties. Plant signaling & behavior 2014:8]
97  LOC_Os03g18200   heat shock protein DnaJ, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
98  LOC_Os03g18850   pathogenesis-related Bet v I family protein, putative, expressed
11527396
[Jwa N S et al. Molecular cloning and characterization of a novel Jasmonate inducible pathogenesis-related class 10 protein gene, JIOsPR10, from rice (Oryza sativa L.) seedling leaves. Biochemical and biophysical research communications 2001:286]
18074138
[ Kim Sun Tae et al. The rice pathogen-related protein 10 (JIOsPR10) is induced by abiotic and biotic stresses and exhibits ribonuclease activity. Plant cell reports 2008:27]
99  LOC_Os03g20460   guanylate kinase, putative, expressed
24388528
[Jiang Quan et al. Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage. Plant science : an international journal of experimental plant biology 2014:215-216]
100  LOC_Os03g27960   sodium/calcium exchanger protein, putative, expressed
24482191
[Yamada Nana et al. Expression and functional analysis of putative vacuolar Ca(2+)-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars. Protoplasma 2014:]
101  LOC_Os03g30420   cytochrome P450, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
102  LOC_Os03g44620   chaperone protein dnaJ, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
103  LOC_Os03g48770   Cupin domain containing protein, expressed
23094910
[ Jeong Jin Seo et al. OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012: ]
104  LOC_Os03g49990   GRAS family transcription factor domain containing protein, expressed
24475234
[Shan Chi et al. OsGA2ox5, a Gibberellin Metabolism Enzyme, Is Involved in Plant Growth, the Root Gravity Response and Salt Stress. PloS one 2014:9]
105  LOC_Os03g50480   phosphoglucomutase, putative, expressed
24412201
[Wang Zhan Qi et al. Root proteome of rice studied by iTRAQ provides integrated insight into aluminum stress tolerance mechanisms in plants. Journal of proteomics 2014:98]
106  LOC_Os03g53340   HSF-type DNA-binding domain containing protein, expressed
24459431
[Rerksiri Wirat et al. Expression and promoter analysis of six heat stress-inducible genes in rice. The Scientific World Journal 2013:2013]
107  LOC_Os03g57340   chaperone protein dnaJ, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
108  LOC_Os03g60080   NAC domain-containing protein 67, putative, expressed
22551450
[ Redillas Mark C F R et al. The overexpression of OsNAC9 alters the root architecture of rice plants enhancing drought resistance and grain yield under field conditions. Plant biotechnology journal 2012:10]
109  LOC_Os03g60509   expressed protein
24389954
[Chen Xiaoqiong et al. Physiological factors affecting transcription of genes involved in the flavonoid biosynthetic pathway in different rice varieties. Plant signaling & behavior 2014:8]
110  LOC_Os03g63970   gibberellin 20 oxidase 1, putative, expressed
23329372
[Ho Shin-Lon et al. Sugar starvation- and GA-inducible calcium-dependent protein kinase 1 feedback regulates GA biosynthesis and activates a 14-3-3 protein to confer drought tolerance in rice seedlings. Plant molecular biology 2013:]
111  LOC_Os04g01740   heat shock protein, putative, expressed
24459431
[Rerksiri Wirat et al. Expression and promoter analysis of six heat stress-inducible genes in rice. The Scientific World Journal 2013:2013]
112  LOC_Os04g30240   OsWAK60 - OsWAK receptor-like protein kinase, expressed
22551450
[ Redillas Mark C F R et al. The overexpression of OsNAC9 alters the root architecture of rice plants enhancing drought resistance and grain yield under field conditions. Plant biotechnology journal 2012:10]
113  LOC_Os04g43070   ammonium transporter protein, putative, expressed
24420570
[Ranathunge Kosala et al. AMT1;1 transgenic rice plants with enhanced NH4 + permeability show superior growth and higher yield under optimal and suboptimal NH4 + conditions. Journal of experimental botany 2014:65]
114  LOC_Os04g45470   vacuolar-processing enzyme precursor, putative, expressed
24388520
[Christoff Ana Paula et al. Uncovering legumain genes in rice. Plant science : an international journal of experimental plant biology 2014:215-216]
115  LOC_Os04g51460   glycosyl hydrolases family 16, putative, expressed
23094910
[ Jeong Jin Seo et al. OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012: ]
116  LOC_Os04g55940   sodium/calcium exchanger protein, putative, expressed
24482191
[Yamada Nana et al. Expression and functional analysis of putative vacuolar Ca(2+)-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars. Protoplasma 2014:]
117  LOC_Os04g56400   glutamine synthetase, catalytic domain containing protein, expressed
23509111
[Funayama Kazuhiro et al. Cytosolic glutamine synthetase1;2 is responsible for the primary assimilation of ammonium in rice roots. Plant & cell physiology 2013:]
24420570
[Ranathunge Kosala et al. AMT1;1 transgenic rice plants with enhanced NH4 + permeability show superior growth and higher yield under optimal and suboptimal NH4 + conditions. Journal of experimental botany 2014:65]
118  LOC_Os04g56970   tubulin/FtsZ domain containing protein, putative, expressed
24388528
[Jiang Quan et al. Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage. Plant science : an international journal of experimental plant biology 2014:215-216]
119  LOC_Os05g06670   gibberellin 2-oxidase, putative, expressed
24475234
[Shan Chi et al. OsGA2ox5, a Gibberellin Metabolism Enzyme, Is Involved in Plant Growth, the Root Gravity Response and Salt Stress. PloS one 2014:9]
120  LOC_Os05g08540   gibberellin 3-beta-dioxygenase 2-2, putative, expressed
24475234
[Shan Chi et al. OsGA2ox5, a Gibberellin Metabolism Enzyme, Is Involved in Plant Growth, the Root Gravity Response and Salt Stress. PloS one 2014:9]
121  LOC_Os05g12240   chalcone synthase, putative
24389954
[Chen Xiaoqiong et al. Physiological factors affecting transcription of genes involved in the flavonoid biosynthetic pathway in different rice varieties. Plant signaling & behavior 2014:8]
122  LOC_Os05g12260   CAPIP1, putative, expressed
24474809
[Kim Hyunmi et al. Overexpression of PYL5 in rice enhances drought tolerance, inhibits growth, and modulates gene expression. Journal of experimental botany 2014:65]
123  LOC_Os05g15770   glycosyl hydrolase, putative, expressed
24391034
[Guo X L et al. Molecular cloning and expression of drought-induced protein 3 (DIP3) encoding a class III chitinase in upland rice. Genetics and molecular research : GMR 2013:12]
124  LOC_Os05g31670   AWPM-19-like membrane family protein, putative, expressed
24459431
[Rerksiri Wirat et al. Expression and promoter analysis of six heat stress-inducible genes in rice. The Scientific World Journal 2013:2013]
125  LOC_Os05g33730   gibberellin receptor GID1L2, putative, expressed
24475234
[Shan Chi et al. OsGA2ox5, a Gibberellin Metabolism Enzyme, Is Involved in Plant Growth, the Root Gravity Response and Salt Stress. PloS one 2014:9]
126  LOC_Os05g39850   MCM3 - Putative minichromosome maintenance MCM complex subunit 3, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
127  LOC_Os05g41580   calcium-transporting ATPase, plasma membrane-type, putative, expressed
24482191
[Yamada Nana et al. Expression and functional analysis of putative vacuolar Ca(2+)-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars. Protoplasma 2014:]
128  LOC_Os05g46030   myosin head family protein, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
129  LOC_Os05g46620   chaperone protein dnaJ 10, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
130  LOC_Os05g48200   glutamate synthase, chloroplast precursor, putative, expressed
24420570
[Ranathunge Kosala et al. AMT1;1 transgenic rice plants with enhanced NH4 + permeability show superior growth and higher yield under optimal and suboptimal NH4 + conditions. Journal of experimental botany 2014:65]
131  LOC_Os05g48810   dnaJ domain containing protein, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
132  LOC_Os05g49170   cold acclimation protein WCOR413, putative, expressed
23918260
[Liu Citao et al. OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice. Plant molecular biology 2014:84]
133  LOC_Os05g51570   vacuolar-processing enzyme precursor, putative, expressed
24388520
[Christoff Ana Paula et al. Uncovering legumain genes in rice. Plant science : an international journal of experimental plant biology 2014:215-216]
134  LOC_Os05g51610   sodium/calcium exchanger protein, putative, expressed
24482191
[Yamada Nana et al. Expression and functional analysis of putative vacuolar Ca(2+)-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars. Protoplasma 2014:]
135  LOC_Os06g02620   chaperone protein dnaJ, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
136  LOC_Os06g06300   osFTL3 FT-Like3 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
24420930
[Choi Sang Chul et al. Trithorax Group Protein Oryza sativa Trithorax1 Controls Flowering Time in Rice via Interaction with Early heading date3. Plant physiology 2014:164]
137  LOC_Os06g06320   osFTL2 FT-Like2 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
24420930
[Choi Sang Chul et al. Trithorax Group Protein Oryza sativa Trithorax1 Controls Flowering Time in Rice via Interaction with Early heading date3. Plant physiology 2014:164]
138  LOC_Os06g07210   ribonucleoside-diphosphate reductase large subunit, putative, expressed
24388528
[Jiang Quan et al. Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage. Plant science : an international journal of experimental plant biology 2014:215-216]
139  LOC_Os06g08790   ORC1 - Putative origin recognition complex subunit 1, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
140  LOC_Os06g09560   heat shock protein DnaJ, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
24459431
[Rerksiri Wirat et al. Expression and promoter analysis of six heat stress-inducible genes in rice. The Scientific World Journal 2013:2013]
141  LOC_Os06g13810   pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed
24412201
[Wang Zhan Qi et al. Root proteome of rice studied by iTRAQ provides integrated insight into aluminum stress tolerance mechanisms in plants. Journal of proteomics 2014:98]
142  LOC_Os06g14620   ribonucleoside-diphosphate reductase small chain, putative, expressed
24388528
[Jiang Quan et al. Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage. Plant science : an international journal of experimental plant biology 2014:215-216]
143  LOC_Os06g15420   asparagine synthetase, putative, expressed
23509111
[Funayama Kazuhiro et al. Cytosolic glutamine synthetase1;2 is responsible for the primary assimilation of ammonium in rice roots. Plant & cell physiology 2013:]
144  LOC_Os06g16370   CCT/B-box zinc finger protein, putative, expressed
24420930
[Choi Sang Chul et al. Trithorax Group Protein Oryza sativa Trithorax1 Controls Flowering Time in Rice via Interaction with Early heading date3. Plant physiology 2014:164]
145  LOC_Os06g29350   myosin, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
146  LOC_Os06g37180   ATP synthase, putative, expressed
23918260
[Liu Citao et al. OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice. Plant molecular biology 2014:84]
147  LOC_Os06g38120   low-affinity cation transporter, putative, expressed
24627964
[Uraguchi Shimpei et al. Characterization of OsLCT1, a cadmium transporter from indica rice (Oryza sativa). Physiologia plantarum 2014:]
148  LOC_Os06g44160   heat shock protein DnaJ, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
149  LOC_Os06g44230   DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed
24388528
[Jiang Quan et al. Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage. Plant science : an international journal of experimental plant biology 2014:215-216]
150  LOC_Os06g46310   metal transporter Nramp6, putative, expressed
24391861
[Yang Meng et al. OsNRAMP3 Is a Vascular Bundles-Specific Manganese Transporter That Is Responsible for Manganese Distribution in Rice. PloS one 2013:8]
151  LOC_Os06g47310   plant-specific domain TIGR01627 family protein, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
152  LOC_Os07g01020   SOR/SNZ family protein, putative, expressed
23094910
[ Jeong Jin Seo et al. OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012: ]
153  LOC_Os07g01340   gibberellin 2-beta-dioxygenase 7, putative, expressed
24475234
[Shan Chi et al. OsGA2ox5, a Gibberellin Metabolism Enzyme, Is Involved in Plant Growth, the Root Gravity Response and Salt Stress. PloS one 2014:9]
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
154  LOC_Os07g05940   9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
22551450
[ Redillas Mark C F R et al. The overexpression of OsNAC9 alters the root architecture of rice plants enhancing drought resistance and grain yield under field conditions. Plant biotechnology journal 2012:10]
23094910
[ Jeong Jin Seo et al. OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012: ]
155  LOC_Os07g15370   metal transporter Nramp6, putative, expressed
22368778
[Ishimaru Yasuhiro et al. Characterizing the role of rice NRAMP5 in Manganese, Iron and Cadmium Transport. Scientific reports 2012:2]
22589467
[Sasaki Akimasa et al. Nramp5 is a major transporter responsible for manganese and cadmium uptake in rice. The Plant cell 2012:24]
156  LOC_Os07g15460   metal transporter Nramp6, putative, expressed
21697258
[Takahashi Ryuichi et al. The OsNRAMP1 iron transporter is involved in Cd accumulation in rice. Journal of experimental botany 2011:62]
22368778
[Ishimaru Yasuhiro et al. Characterizing the role of rice NRAMP5 in Manganese, Iron and Cadmium Transport. Scientific reports 2012:2]
23700971
[Tiwari Manish et al. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant, cell & environment 2014:37]
157  LOC_Os07g26630   aquaporin protein, putative, expressed
24142111
[Kumar Kundan et al. Two rice plasma membrane intrinsic proteins, OsPIP2;4 and OsPIP2;7, are involved in transport and providing tolerance to boron toxicity. Planta 2014:239]
158  LOC_Os07g30330   cytokinin-O-glucosyltransferase 2, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
159  LOC_Os07g30620   cytokinin-O-glucosyltransferase 2, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
160  LOC_Os07g30774   calmodulin-binding transcription activator 5, putative, expressed
19466605
[Koo Sung Cheol et al. The calmodulin-binding transcription factor OsCBT suppresses defense responses to pathogens in rice. Molecules and cells 2009:27]
161  LOC_Os07g42860   cyclin, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
162  LOC_Os07g46460   ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed
24420570
[Ranathunge Kosala et al. AMT1;1 transgenic rice plants with enhanced NH4 + permeability show superior growth and higher yield under optimal and suboptimal NH4 + conditions. Journal of experimental botany 2014:65]
163  LOC_Os07g47100   transporter, monovalent cation:proton antiporter-2 family, putative, expressed
23918260
[Liu Citao et al. OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice. Plant molecular biology 2014:84]
164  LOC_Os08g01420   PHD-finger domain containing protein, putative, expressed
24420930
[Choi Sang Chul et al. Trithorax Group Protein Oryza sativa Trithorax1 Controls Flowering Time in Rice via Interaction with Early heading date3. Plant physiology 2014:164]
165  LOC_Os08g03290   glyceraldehyde-3-phosphate dehydrogenase, putative, expressed
24412201
[Wang Zhan Qi et al. Root proteome of rice studied by iTRAQ provides integrated insight into aluminum stress tolerance mechanisms in plants. Journal of proteomics 2014:98]
166  LOC_Os08g03380   heat shock protein DnaJ, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
167  LOC_Os08g07840   PolI-like DNA polymerase, putative, expressed
24388528
[Jiang Quan et al. Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage. Plant science : an international journal of experimental plant biology 2014:215-216]
168  LOC_Os08g20544   expressed protein
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
169  LOC_Os08g27040   lipid phosphatase protein, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
170  LOC_Os08g33370   14-3-3 protein, putative, expressed
23329372
[Ho Shin-Lon et al. Sugar starvation- and GA-inducible calcium-dependent protein kinase 1 feedback regulates GA biosynthesis and activates a 14-3-3 protein to confer drought tolerance in rice seedlings. Plant molecular biology 2013:]
171  LOC_Os08g34390   retrotransposon protein, putative, unclassified, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
172  LOC_Os08g42850   peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
23485991
[ Park Hyun Ji et al. A Rice Immunophilin Gene, OsFKBP16-3, Confers Tolerance to Environmental Stress in Arabidopsis and Rice. International journal of molecular sciences 2013:14]
173  LOC_Os09g04890   histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed
24420930
[Choi Sang Chul et al. Trithorax Group Protein Oryza sativa Trithorax1 Controls Flowering Time in Rice via Interaction with Early heading date3. Plant physiology 2014:164]
174  LOC_Os09g13570   CPuORF2 - conserved peptide uORF-containing transcript, expressed
23918260
[Liu Citao et al. OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice. Plant molecular biology 2014:84]
175  LOC_Os09g17560   O-methyltransferase, putative, expressed
22551450
[ Redillas Mark C F R et al. The overexpression of OsNAC9 alters the root architecture of rice plants enhancing drought resistance and grain yield under field conditions. Plant biotechnology journal 2012:10]
23094910
[ Jeong Jin Seo et al. OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012: ]
176  LOC_Os09g31486   DnaK family protein, putative, expressed
15806324
[Yamamoto Taichi et al. Interaction between proliferating cell nuclear antigen (PCNA) and a DnaJ induced by DNA damage. Journal of plant research 2005:118]
177  LOC_Os09g35790   HSF-type DNA-binding domain containing protein, expressed
24459431
[Rerksiri Wirat et al. Expression and promoter analysis of six heat stress-inducible genes in rice. The Scientific World Journal 2013:2013]
178  LOC_Os09g36020   EAP30/Vps36 family domain containing protein, expressed
23275199
[Zhang Xiang-Qian et al. Knockout of the VPS22 component of the ESCRT-II complex in rice (Oryza sativa L.) causes chalky endosperm and early seedling lethality. Molecular biology reports 2012:]
179  LOC_Os09g36200   senescence-inducible chloroplast stay-green protein 1, putative, expressed
24388520
[Christoff Ana Paula et al. Uncovering legumain genes in rice. Plant science : an international journal of experimental plant biology 2014:215-216]
180  LOC_Os09g36680   ribonuclease T2 family domain containing protein, expressed
24268167
[Zheng Jun et al. Overexpression of an S-like ribonuclease gene, OsRNS4, confers enhanced tolerance to high salinity and hyposensitivity to phytochrome-mediated light signals in rice. Plant science : an international journal of experimental plant biology 2014:214]
181  LOC_Os09g36930   aquaporin protein, putative, expressed
24142111
[Kumar Kundan et al. Two rice plasma membrane intrinsic proteins, OsPIP2;4 and OsPIP2;7, are involved in transport and providing tolerance to boron toxicity. Planta 2014:239]
182  LOC_Os09g38980   T-complex protein, putative, expressed
24388528
[Jiang Quan et al. Importance of the rice TCD9 encoding α subunit of chaperonin protein 60 (Cpn60α) for the chloroplast development during the early leaf stage. Plant science : an international journal of experimental plant biology 2014:215-216]
183  LOC_Os10g02840   O-methyltransferase, putative, expressed
23094910
[ Jeong Jin Seo et al. OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012: ]
184  LOC_Os10g02880   O-methyltransferase, putative, expressed
22551450
[ Redillas Mark C F R et al. The overexpression of OsNAC9 alters the root architecture of rice plants enhancing drought resistance and grain yield under field conditions. Plant biotechnology journal 2012:10]
23094910
[ Jeong Jin Seo et al. OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012: ]
185  LOC_Os10g28240   calcium-transporting ATPase, plasma membrane-type, putative, expressed
22551450
[ Redillas Mark C F R et al. The overexpression of OsNAC9 alters the root architecture of rice plants enhancing drought resistance and grain yield under field conditions. Plant biotechnology journal 2012:10]
23094910
[ Jeong Jin Seo et al. OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012: ]
186  LOC_Os10g31720   glycine-rich cell wall structural protein 2 precursor, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
187  LOC_Os10g36924   aquaporin protein, putative, expressed
24654769
[Hanaoka Hideki et al. OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions. The Plant journal : for cell and molecular biology 2014:]
188  LOC_Os10g40100   protein kinase, putative, expressed
24420860
[Guo Lijia et al. Suppression of expression of the putative receptor-like kinase gene NRRB enhances resistance to bacterial leaf streak in rice. Molecular biology reports 2014:]
189  LOC_Os10g40720   expansin precursor, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
190  LOC_Os11g03300   NAC domain transcription factor, putative, expressed
22551450
[ Redillas Mark C F R et al. The overexpression of OsNAC9 alters the root architecture of rice plants enhancing drought resistance and grain yield under field conditions. Plant biotechnology journal 2012:10]
23094910
[ Jeong Jin Seo et al. OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012: ]
191  LOC_Os11g04460   calcium-transporting ATPase, plasma membrane-type, putative, expressed
24482191
[Yamada Nana et al. Expression and functional analysis of putative vacuolar Ca(2+)-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars. Protoplasma 2014:]
192  LOC_Os11g05110   pyruvate kinase, putative, expressed
24412201
[Wang Zhan Qi et al. Root proteome of rice studied by iTRAQ provides integrated insight into aluminum stress tolerance mechanisms in plants. Journal of proteomics 2014:98]
193  LOC_Os11g08210   no apical meristem protein, putative, expressed
23094910
[ Jeong Jin Seo et al. OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012: ]
194  LOC_Os11g09010   lipase, putative, expressed
24420860
[Guo Lijia et al. Suppression of expression of the putative receptor-like kinase gene NRRB enhances resistance to bacterial leaf streak in rice. Molecular biology reports 2014:]
195  LOC_Os11g10990   heat shock protein DnaJ, putative, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
196  LOC_Os11g26750   dehydrin, putative, expressed
24459431
[Rerksiri Wirat et al. Expression and promoter analysis of six heat stress-inducible genes in rice. The Scientific World Journal 2013:2013]
197  LOC_Os11g34650   hypothetical protein
23233223
[Naren et al. Overexpression of OsDPR, a novel rice gene highly expressed under iron deficiency, suppresses plant growth. Science China. Life sciences 2012:55]
198  LOC_Os11g37970   WIP5 - Wound-induced protein precursor, expressed
19466605
[Koo Sung Cheol et al. The calmodulin-binding transcription factor OsCBT suppresses defense responses to pathogens in rice. Molecules and cells 2009:27]
199  LOC_Os11g43950   dnaJ domain containing protein, expressed
23160806
[Sarkar Neelam K et al. Functional relevance of J-protein family of rice (Oryza sativa). Cell stress & chaperones 2013:18]
200  LOC_Os12g04220   calcium-transporting ATPase, plasma membrane-type, putative
24482191
[Yamada Nana et al. Expression and functional analysis of putative vacuolar Ca(2+)-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars. Protoplasma 2014:]
201  LOC_Os12g05110   pyruvate kinase, putative, expressed
24412201
[Wang Zhan Qi et al. Root proteome of rice studied by iTRAQ provides integrated insight into aluminum stress tolerance mechanisms in plants. Journal of proteomics 2014:98]
202  LOC_Os12g36830   pathogenesis-related Bet v I family protein, putative, expressed
24420860
[Guo Lijia et al. Suppression of expression of the putative receptor-like kinase gene NRRB enhances resistance to bacterial leaf streak in rice. Molecular biology reports 2014:]
203  LOC_Os12g36880   pathogenesis-related Bet v I family protein, putative, expressed
19466605
[Koo Sung Cheol et al. The calmodulin-binding transcription factor OsCBT suppresses defense responses to pathogens in rice. Molecules and cells 2009:27]
24420860
[Guo Lijia et al. Suppression of expression of the putative receptor-like kinase gene NRRB enhances resistance to bacterial leaf streak in rice. Molecular biology reports 2014:]
204  LOC_Os12g42060   OsWAK128b - OsWAK receptor-like protein kinase, expressed
22551450
[ Redillas Mark C F R et al. The overexpression of OsNAC9 alters the root architecture of rice plants enhancing drought resistance and grain yield under field conditions. Plant biotechnology journal 2012:10]
205  LOC_Os12g42160   kinesin motor domain containing protein, putative, expressed
24498428
[Zhang Jie et al. The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9]
206  NP_001238153   delta-pyrroline-5-carboxylate synthetase [Glycine max]
24376625
[Zhang Xiu-Xiang et al. OsDREB2A, a Rice Transcription Factor, Significantly Affects Salt Tolerance in Transgenic Soybean. PloS one 2013:8]

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India